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DolJOral78_scaffold_238_28

Organism: DOLJORAL78_Gammaproteobacteria_37_15

near complete RP 47 / 55 MC: 1 BSCG 45 / 51 ASCG 11 / 38
Location: comp(38784..39818)

Top 3 Functional Annotations

Value Algorithm Source
pilus assembly protein PilM n=1 Tax=Psychrobacter sp. PAMC 21119 RepID=UPI0002886D6D similarity UNIREF
DB: UNIREF100
  • Identity: 39.3
  • Coverage: 366.0
  • Bit_score: 240
  • Evalue 3.30e-60
Type IV pilus biogenesis protein PilM {ECO:0000313|EMBL:GAF52422.1}; TaxID=1298608 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psyc similarity UNIPROT
DB: UniProtKB
  • Identity: 39.6
  • Coverage: 366.0
  • Bit_score: 241
  • Evalue 1.60e-60
pilM; type IV pilus assembly protein similarity KEGG
DB: KEGG
  • Identity: 40.7
  • Coverage: 369.0
  • Bit_score: 238
  • Evalue 2.10e-60

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Taxonomy

Psychrobacter sp. JCM 18900 → Psychrobacter → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1035
GTGAGTGTATTTTCTCTGTTTTTTAACAAAAAACAGCAGCTTTTGGGGGTGGATATTGGTTCGGCACAAGTTAAGATTGTTGAGCTAGTGCGAAATTCTCAAGGGTTATTTTTACAAGCATATGCCATAGAGCCAATGCCAGCAGGGTTAGTGATTGATAGAACCATCACAGATGCTGAGGCAGTGGGACAAATCATTACAACAGCGCTTAACAAAACCAAATTTATCAGTAAACGGGCAGCAACAGCGGTTGTTGGTTCAGTTGTGATGACAAAAGTTATTGAGCTGCATTCAAGCCTGAATGATATAGAACGAGAAGCACAAATTTGCCTTGAGGCAGAAAAACATATTCCTTATCCATTATCAGAAGTTAATTTTGATTTTGATGTCATTGCTCGCTCATCGCAAAATCCAAATTATGACAAAGTGTTACTTGCGGTGTCGCTAACAGAAAATGTTGAACTAAGAGCAGATGCATTAATATTTGCGGGGTTAGAGGCGAAAGTTGTTGATATCGAATGCTATGCAATGCAAAGAGCGTTATCTTTGGTTATGAGTGATGGTATTGATGCTTTAGATGACAATATTGTGATGATTGATATAGGGCATCGCCAGTTTACTGTGTATGTTTTTAAAAATAAGGAAATTATTTATAACAAAGAGCAAGCAGCTGACTTGAGTTTTAGCGATGTAAATACATCTGACAATGAGGTATTGGCTAAAAAACTGATAGAAGCAATTAATCATGCTTTGTCATTTTATCTTTCTACTCAAACCAATCATCTAACAAAAAATGGAATTAAGAACCTATTTTTGTGTGGTGGACTTAAGCCTACGATTATGCAGTATGTGCAACATGCACTGTCTCAGTCGTTAGTTGCTTCAAATATCGCTGTTGACAATCATATTAATATTAACATTGCCAACCCTTTTCATAATATGGGTATATCTACCTTTATTAATCCCACTCAATTAAAGCAAGATGCCCCCAGTTTAATGCTTGCTTGCGGTTTGGCAATGAGGAGTTTTGATTAA
PROTEIN sequence
Length: 345
VSVFSLFFNKKQQLLGVDIGSAQVKIVELVRNSQGLFLQAYAIEPMPAGLVIDRTITDAEAVGQIITTALNKTKFISKRAATAVVGSVVMTKVIELHSSLNDIEREAQICLEAEKHIPYPLSEVNFDFDVIARSSQNPNYDKVLLAVSLTENVELRADALIFAGLEAKVVDIECYAMQRALSLVMSDGIDALDDNIVMIDIGHRQFTVYVFKNKEIIYNKEQAADLSFSDVNTSDNEVLAKKLIEAINHALSFYLSTQTNHLTKNGIKNLFLCGGLKPTIMQYVQHALSQSLVASNIAVDNHININIANPFHNMGISTFINPTQLKQDAPSLMLACGLAMRSFD*