ggKbase home page

ar4r2_scaffold_2076_13

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: 10301..11266

Top 3 Functional Annotations

Value Algorithm Source
Sigma54 specific transcriptional regulator, Fis family n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BVU5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 66.0
  • Coverage: 318.0
  • Bit_score: 416
  • Evalue 1.80e-113
  • rbh
Sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:EIJ35488.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 66.0
  • Coverage: 318.0
  • Bit_score: 416
  • Evalue 2.60e-113
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 54.9
  • Coverage: 319.0
  • Bit_score: 337
  • Evalue 5.20e-90

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 966
ATGGATTCCAATCATTTAATCACGCAATCACCACTTGTGCAGGCAGCGTTACAGTCCGCCATGCAAGTGGCAAAAACGGATGCTCTCATCCTCATTCTCGGCGAGTCTGGTACTGGTAAGGAGCGGCTCGCCCGCGACATTCATACGGCTAGTCCCCGCAAAAATCAGCCATTCATCACTGTGAACTGCGCCGCGCTGCCGTCCACATTGGCAGAATCGCTGTTATTTGGGCATACCAAGGGCGCGTTTACCGGAGCCAATGAAGCTAATCCCGGCTTGATTGCAGCCGCCGATGGCGGAACGCTGTTTTTCGATGAAATCGGTGAACTGCCGTTAAATTTACAACCCAAACTATTACGCTTTCTGGAACAAGGCGATATTTTGTCGCTGGGTAAAACACGTCCGCAACGGGTGAATATCAGGGTTCTCGCGGCAACGCATTGCAACCTGAAAGCGATGGTTGATAGCGGCACATTTCGCGCCGATTTATTTTACCGCCTGAATGTTATCCCGCTGGAACTCCCACCCTTGCGCAATCGACAAGAAGATATTGAATCTTTGATGCAATATTTTTTGGCGCATTTTGCACGCCAACATCAACAAGCTGAAAGTTACTTAAGCGACGCTGCATTAATGCTGTTACAAACATACCGTTGGCCGGGCAATATTCGTGAATTACGCAATCTGTGTGAAAACCTCAGCATTCTCCAAGCAGGGCGTGAAATCACCCCGGATAATTTATTGGCATCGCTGCACACACATTCATTATCCACAGTGCAAACGACAAGCGATAACCAGCGTTTCATCCTGCCTGACGACGGCGTTAAGCTTGATGAATTAGAAAATCATCTTTTGCACGCAGCTCTAGATCGCACCAACGGCAATAAAACCAAAGCAGCTCAGTTATTAGGGATCAGCCGCGACGCGCTTAATTACCGATTTAAGAAGCGTACCGAAATCAATTAG
PROTEIN sequence
Length: 322
MDSNHLITQSPLVQAALQSAMQVAKTDALILILGESGTGKERLARDIHTASPRKNQPFITVNCAALPSTLAESLLFGHTKGAFTGANEANPGLIAAADGGTLFFDEIGELPLNLQPKLLRFLEQGDILSLGKTRPQRVNIRVLAATHCNLKAMVDSGTFRADLFYRLNVIPLELPPLRNRQEDIESLMQYFLAHFARQHQQAESYLSDAALMLLQTYRWPGNIRELRNLCENLSILQAGREITPDNLLASLHTHSLSTVQTTSDNQRFILPDDGVKLDELENHLLHAALDRTNGNKTKAAQLLGISRDALNYRFKKRTEIN*