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ar4r2_scaffold_4914_12

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: 9923..10645

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 162.0
  • Bit_score: 316
  • Evalue 3.50e-83
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Thiothrix disciformis RepID=UPI00038226D4 similarity UNIREF
DB: UNIREF100
  • Identity: 98.8
  • Coverage: 162.0
  • Bit_score: 316
  • Evalue 2.50e-83
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 96.3
  • Coverage: 162.0
  • Bit_score: 307
  • Evalue 3.30e-81

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 723
TTGGATGGTGGGCGTTTCGCTACCTCTGACTTGAATGACCTGTATCGTCGCGTTATCAACCGTAACAACCGTTTGAAGCGTTTGTTAGAACTGAACGCCCCGGACATTATCGTGCGCAACGAAAAACGTATGCTGCAAGAGTCTGTGGATGCGTTACTGGATAACGGTCGTCGTGGTCGTGCCATTACCGGTTCTAACAAGCGTCCGCTGAAATCTTTGTCAGACATGATCAAAGGTAAGCAAGGTCGTTTCCGTCAAAACCTGTTGGGTAAACGTGTCGACTACTCTGGTCGTTCGGTTATCGTGGTCGGGCCTACGCTGCGCTTACATCAGTGCGGTTTGCCAAAGAAAATGGCGTTGGAACTGTTCAAGCCATTTATTTTCGGTAAATTGCAGCGTCGTGGCTTGGCAACAACGATCAAAGCGGCCAAAAAGCTGGTTGAACGCGAAACGGCAGAAGTTTGGGATATTCTCGCGGAAGTTATCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGGAAGCGCAGTTGGAAGCGCGTACCCTGATGATGGCGACCAACAACGTCCTGTCACCAGCGAACGGCGAGCCGATTATTGTGCCGTCGCAGGACATCGTTTTGGGCTTGTATTACATGACCCGCGATGCCATCAATGCGAAAGGCGAGGGCATGGTGTTTGCGGATCCGATGGAAGCGCAACGTGCGTATGA
PROTEIN sequence
Length: 241
LDGGRFATSDLNDLYRRVINRNNRLKRLLELNAPDIIVRNEKRMLQESVDALLDNGRRGRAITGSNKRPLKSLSDMIKGKQGRFRQNLLGKRVDYSGRSVIVVGPTLRLHQCGLPKKMALELFKPFIFGKLQRRGLATTIKAAKKLVERETAEVWDILAEVIXXXXXXXXXXXXXXXGSAVGSAYPDDGDQQRPVTSERRADYCAVAGHRFGLVLHDPRCHQCERRGHGVCGSDGSATCV*