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ar4r2_scaffold_15521_3

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: comp(732..1067)

Top 3 Functional Annotations

Value Algorithm Source
Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BR36_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 82.0
  • Coverage: 111.0
  • Bit_score: 190
  • Evalue 7.40e-46
Sigma 54 modulation protein/ribosomal protein S30EA {ECO:0000313|EMBL:EIJ33829.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 82.0
  • Coverage: 111.0
  • Bit_score: 190
  • Evalue 1.00e-45
sigma 54 modulation protein/30S ribosomal protein S30P similarity KEGG
DB: KEGG
  • Identity: 62.7
  • Coverage: 102.0
  • Bit_score: 140
  • Evalue 2.50e-31

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 336
ATGCAATTAGAAATCACTGGTCATCATCTTGAAGTGACAGATTCCATGAGTGCTTACATCCGTGAGAAAGCGGATCGTCTGAAACGTCACTTTGATCAGGTAATGAACATTCACTTTATTTTGGAAGTCGAAAAACAGCAGCATAAGGCGGAAGCTACCCTGCATGTTAGCGGCAACCACATTTTTGCGAATGCTCATGCCAACGATATGTATGCAGCCATTGATGCCTTGACTGACAAACTGGATCGCCAGATTGTCAAGCACAAGGAAAAGGTGAAAGATCACCATCGCCAAGAAGCCGCACAACTGGTTGATGTGGCAGCGTCGGCGGATTAA
PROTEIN sequence
Length: 112
MQLEITGHHLEVTDSMSAYIREKADRLKRHFDQVMNIHFILEVEKQQHKAEATLHVSGNHIFANAHANDMYAAIDALTDKLDRQIVKHKEKVKDHHRQEAAQLVDVAASAD*