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gwf2_scaffold_6375

Alias: GWF2_OD1_44_17_18

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwf2_scaffold_6375_1
R_RIF_OD1_02_44_20, RIF-OD1-2, Parcubacteria, Bacteria

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comp(3..776)
-----------------
DNA (774bp)
protein (258aa)
tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_02_44_20_curated
tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
tRNA dimethylallyltransferase
gwf2_scaffold_6375_2
R_RIF_OD1_02_44_20, RIF-OD1-2, Parcubacteria, Bacteria

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799..2061
-----------------
DNA (1263bp)
protein (421aa)
prephenate dehydratase; K14170 chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_02_44_20_curated
prephenate dehydratase
Chorismate mutase/prephenate dehydratase
gwf2_scaffold_6375_3

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2068..2178
-----------------
DNA (111bp)
protein (37aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT49933.1}; TaxID=1618969 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_44_17.;"
gwf2_scaffold_6375_4

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2413..3606
-----------------
DNA (1194bp)
protein (398aa)
Elongation factor Tu {ECO:0000313|EMBL:KKT47506.1}; TaxID=1618929 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_44_17.;"
tuf1; elongation factor Tu
Elongation factor Tu
gwf2_scaffold_6375_5
R_RIF_OD1_02_44_20, RIF-OD1-2, Parcubacteria, Bacteria

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3682..4200
-----------------
DNA (519bp)
protein (173aa)
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_02_44_20_curated
rpsJ; 30S ribosomal protein S10
30S ribosomal protein S10
gwf2_scaffold_6375_6

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4211..4834
-----------------
DNA (624bp)
protein (208aa)
50S ribosomal protein L3 {ECO:0000313|EMBL:KKT47508.1}; TaxID=1618929 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_44_17.;"
rplC; 50S ribosomal protein L3
50S ribosomal protein L3
gwf2_scaffold_6375_7

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4831..5511
-----------------
DNA (681bp)
protein (227aa)
50S ribosomal protein L4 {ECO:0000313|EMBL:KKT49937.1}; TaxID=1618969 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_44_17.;"
50S ribosomal protein L4
50S ribosomal protein L4
gwf2_scaffold_6375_8

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5456..5821
-----------------
DNA (366bp)
protein (122aa)
50S ribosomal protein L23 {ECO:0000313|EMBL:KKT49938.1}; TaxID=1618969 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_44_17.;"
50S ribosomal protein L25
50S ribosomal protein L23
gwf2_scaffold_6375_9

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5823..6665
-----------------
DNA (843bp)
protein (281aa)
50S ribosomal protein L2 {ECO:0000313|EMBL:KKT49939.1}; TaxID=1618969 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_44_17.;"
LSU ribosomal protein L2P
50S ribosomal protein L2
gwf2_scaffold_6375_10

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6680..7015
-----------------
DNA (336bp)
protein (112aa)
Ribosomal protein S19 {ECO:0000313|EMBL:KKT47512.1}; TaxID=1618929 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_44_17.;"
rpsS; ribosomal protein S19 (BS19)
Ribosomal protein S19
gwf2_scaffold_6375_11

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7042..7560
-----------------
DNA (519bp)
protein (173aa)
50S ribosomal protein L22 {ECO:0000313|EMBL:KKT49941.1}; TaxID=1618969 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_44_17.;"
50S ribosomal protein L22
50S ribosomal protein L22
gwf2_scaffold_6375_12
R_RIF_OD1_02_44_20, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists


7567..8241
-----------------
DNA (675bp)
protein (225aa)
30S ribosomal protein S3 Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_02_44_20_curated
30S ribosomal protein S3
30S ribosomal protein S3
gwf2_scaffold_6375_13
R_RIF_OD1_02_44_20, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists


8244..8660
-----------------
DNA (417bp)
protein (139aa)
50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_02_44_20_curated
50S ribosomal protein L16
50S ribosomal protein L16
gwf2_scaffold_6375_14
R_RIF_OD1_02_44_20, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists


8666..8848
-----------------
DNA (183bp)
protein (61aa)
50S ribosomal protein L29
Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_02_44_20_curated
gwf2_scaffold_6375_15
R_RIF_OD1_02_44_20, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists


8845..9087
-----------------
DNA (243bp)
protein (81aa)
rpsQ; 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_02_44_20_curated
rpsQ; 30S ribosomal protein S17
30S ribosomal protein S17
gwf2_scaffold_6375_16

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9090..9461
-----------------
DNA (372bp)
protein (124aa)
50S ribosomal protein L14 {ECO:0000313|EMBL:KKT47518.1}; TaxID=1618929 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_44_17.;"
rplN; 50S ribosomal protein L14
50S ribosomal protein L14
gwf2_scaffold_6375_17
R_RIF_OD1_02_44_20, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists


9458..9769
-----------------
DNA (312bp)
protein (104aa)
50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_02_44_20_curated
50S ribosomal protein L24
50S ribosomal protein L24
gwf2_scaffold_6375_18

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9777..10313
-----------------
DNA (537bp)
protein (179aa)
50S ribosomal protein L5 {ECO:0000313|EMBL:KKT47520.1}; TaxID=1618929 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_44_17.;"
50S ribosomal protein L5
50S ribosomal protein L5
gwf2_scaffold_6375_19

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10528..10914
-----------------
DNA (387bp)
protein (129aa)
30S ribosomal protein S8 {ECO:0000313|EMBL:KKT49949.1}; TaxID=1618969 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_44_17.;"
30S ribosomal protein S8
30S ribosomal protein S8
gwf2_scaffold_6375_20

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10918..11469
-----------------
DNA (552bp)
protein (184aa)
50S ribosomal protein L6 {ECO:0000313|EMBL:KKT47522.1}; TaxID=1618929 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_44_17.;"
rplF; 50S ribosomal protein L6
50S ribosomal protein L6
gwf2_scaffold_6375_21
R_RIF_OD1_02_44_20, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists


11564..11800
-----------------
DNA (237bp)
protein (79aa)
rplR; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_02_44_20_curated
50S ribosomal protein L18
50S ribosomal protein L18
gwf2_scaffold_6375_22
R_RIF_OD1_02_44_20, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists


11831..12274
-----------------
DNA (444bp)
protein (148aa)
30S ribosomal protein S5, chloroplastic-like Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_02_44_20_curated
30S ribosomal protein S5
Ribosomal protein rpS5 (Fragment)
gwf2_scaffold_6375_23
R_RIF_OD1_02_44_20, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists


12290..12745
-----------------
DNA (456bp)
protein (152aa)
LSU ribosomal protein L15P Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_02_44_20_curated
LSU ribosomal protein L15P
50S ribosomal protein L15
gwf2_scaffold_6375_24
R_RIF_OD1_02_44_20, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists


12742..14034
-----------------
DNA (1293bp)
protein (431aa)
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_02_44_20_curated
preprotein translocase subunit SecY
Protein translocase subunit SecY
gwf2_scaffold_6375_25

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14021..14689
-----------------
DNA (669bp)
protein (223aa)
Adenylate kinase {ECO:0000313|EMBL:KKT49955.1}; TaxID=1618969 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_44_17.;"
adenylate kinase
Adenylate kinase
gwf2_scaffold_6375_26

Not on your lists

14676..15455
-----------------
DNA (780bp)
protein (260aa)
methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase {ECO:0000313|EMBL:KKT49956.1}; TaxID=1618969 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_44_17.;"
Methionine aminopeptidase
gwf2_scaffold_6375_27

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15452..15811
-----------------
DNA (360bp)
protein (120aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT49957.1}; TaxID=1618969 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_44_17.;"
endonuclease
Putative Holliday junction resolvase
gwf2_scaffold_6375_28

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comp(15813..16091)
-----------------
DNA (279bp)
protein (93aa)
50S ribosomal protein L27 {ECO:0000313|EMBL:KKT49958.1}; TaxID=1618969 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_44_17.;"
ribosomal protein L27
50S ribosomal protein L27
gwf2_scaffold_6375_29

Not on your lists

16233..17210
-----------------
DNA (978bp)
protein (326aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT47531.1}; Flags: Fragment;; TaxID=1618929 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_44_17.;"
Superfamily II DNA/RNA helicase
Putative uncharacterized protein
Displaying 29 items

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