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scnpilot_cont_500_p_scaffold_514

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_514_1
R_Gammaproteobacteria_37_14, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..911
DNA (909bp) protein (303aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IY96_9GAMM
nitrilase (nthA-like) Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_37_14_curated
nitrilase (nthA-like)
scnpilot_cont_500_p_scaffold_514_2
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(962..1444)
DNA (483bp) protein (161aa)
Putative uncharacterized protein n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PLD7_CELJU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE84503.1}; TaxID=498211 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio japonicu
scnpilot_cont_500_p_scaffold_514_3
GWE2_Gammaproteobacteria_42_36_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1619..3130
DNA (1512bp) protein (504aa)
Mg chelatase, subunit ChlI id=1876264 bin=GWE2_Gammaproteobacteria_42_36 species=Methylomonas methanica genus=Methylomonas taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE2_Gammaproteobacteria_42_36 organism_group=Gammaproteobacteria organism_desc=Small but looks good rbh
Mg chelatase subunit ChlI; K07391 magnesium chelatase family protein Tax=GWE2_Gammaproteobacteria_42_36_curated
Mg chelatase-like protein
scnpilot_cont_500_p_scaffold_514_4
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3203..5254
DNA (2052bp) protein (684aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000381C333
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
hypothetical protein
scnpilot_cont_500_p_scaffold_514_5
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5394..7409
DNA (2016bp) protein (672aa)
ATP-dependent DNA helicase Rep n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GLW7_THISH
ATP-dependent DNA helicase Rep
Tax=BJP_IG2102_Gammaproteobacteria_62_140
scnpilot_cont_500_p_scaffold_514_6
Legionella oakridgensis, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8372..8809)
DNA (438bp) protein (146aa)
Cytochrome C n=9 Tax=Alteromonas macleodii RepID=F2G1X7_ALTMD
Cytochrome c5 {ECO:0000313|EMBL:AHE66072.1}; TaxID=1268635 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella oakridgensis ATCC 337
cytochrome C
scnpilot_cont_500_p_scaffold_514_7
unknown

Not on your lists

9205..10638
DNA (1434bp) protein (478aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_514_8
Methylomonas denitrificans, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10668..11405)
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Methylomonas sp. MK1 RepID=UPI00037425DB
Metal-dependent hydrolase {ECO:0000313|EMBL:KHD33471.1}; TaxID=1538553 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas d
hypothetical protein
scnpilot_cont_500_p_scaffold_514_9
Idiomarina sp. A28L, Idiomarina, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11667..12620
DNA (954bp) protein (318aa)
Putative glutathione S-transferase n=1 Tax=Idiomarina sp. A28L RepID=F7RXD1_9GAMM
Putative glutathione S-transferase {ECO:0000313|EMBL:EGN75663.1}; TaxID=1036674 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.;" source="Idiomarin
Glutathione S-transferase, omega
scnpilot_cont_500_p_scaffold_514_10
Pseudoalteromonas tunicata, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12653..13495
DNA (843bp) protein (281aa)
Site-specific DNA-methyltransferase (adenine-specific) {ECO:0000256|RuleBase:RU361257}; EC=2.1.1.72 {ECO:0000256|RuleBase:RU361257};; TaxID=87626 species="Bacteria; Proteobacteria; Gammaproteobacteria
DNA adenine methylase n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4CEM5_9GAMM
DNA adenine methylase
scnpilot_cont_500_p_scaffold_514_11
Methylococcaceae bacterium Sn10-6, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13479..14195)
DNA (717bp) protein (239aa)
thiol:disulfide interchange protein DsbA n=1 Tax=Methylovulum miyakonense RepID=UPI00035F3E1D
Thiol:disulfide interchange protein {ECO:0000256|PIRNR:PIRNR001488}; TaxID=1632867 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae.;" source="Methylococcaceae
dsbA; thiol:disulfide interchange protein DsbA
scnpilot_cont_500_p_scaffold_514_12
Methylophaga thiooxydans, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14207..15094)
DNA (888bp) protein (296aa)
Cytochrome c subfamily, putative n=1 Tax=Methylophaga thiooxydans DMS010 RepID=C0N3K0_9GAMM
Cytochrome c subfamily, putative {ECO:0000313|EMBL:EEF80649.1}; TaxID=637616 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylo
cytochrome c class I
scnpilot_cont_500_p_scaffold_514_13
Endozoicomonas montiporae, Endozoicomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15610..16266
DNA (657bp) protein (219aa)
Probable GTP-binding protein EngB n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4SXN4_META2
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=1027273 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Endozoicomonas.;" source="End
GTP-binding protein
scnpilot_cont_500_p_scaffold_514_14
endosymbiont of Tevnia jerichonana, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16598..19309)
DNA (2712bp) protein (904aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=1049564 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source=
polA; DNA polymerase I (EC:2.7.7.7)
DNA polymerase I n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00035C0BC8
scnpilot_cont_500_p_scaffold_514_15
GWE2_Gammaproteobacteria_37_16_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19302..21500)
DNA (2199bp) protein (733aa)
recombinase D; K03581 exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] Tax=GWE2_Gammaproteobacteria_37_16_curated
Helicase, RecD/TraA family id=1934678 bin=GWE2_Gammaproteobacteria_37_16 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_Gammaproteobacteria_37_16 organism_group=Gammaproteobacteria organism_desc=Looks good, but small
exodeoxyribonuclease V subunit alpha
scnpilot_cont_500_p_scaffold_514_16
unknown

Not on your lists

22088..23752
DNA (1665bp) protein (555aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_514_17
unknown

Not on your lists

comp(23857..25434)
DNA (1578bp) protein (526aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_514_18
R_Gammaproteobacteria_57_10, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25674..27869)
DNA (2196bp) protein (732aa)
DNA helicase II n=1 Tax=Tolumonas auensis (strain DSM 9187 / TA4) RepID=C4L980_TOLAT
DNA helicase II Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_57_10_curated
DNA helicase II
scnpilot_cont_500_p_scaffold_514_19
Legionella oakridgensis, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27873..29135)
DNA (1263bp) protein (421aa)
Major facilitator family transporter n=2 Tax=Legionella longbeachae RepID=D1REP9_LEGLO
Sugar phosphate permease {ECO:0000313|EMBL:ETO92926.1}; TaxID=1274403 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella oakridgens
major facilitator membrane proteins
scnpilot_cont_500_p_scaffold_514_20
R_Gammaproteobacteria_41_20, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29277..30575
DNA (1299bp) protein (433aa)
hmgA; homogentisate 1,2-dioxygenase (EC:1.13.11.5); K00451 homogentisate 1,2-dioxygenase [EC:1.13.11.5] Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_41_20_curated
hmgA; homogentisate 1,2-dioxygenase (EC:1.13.11.5)
homogentisate 1,2-dioxygenase n=1 Tax=Halomonas sp. KM-1 RepID=UPI000287D864
scnpilot_cont_500_p_scaffold_514_21
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30816..31220)
DNA (405bp) protein (135aa)
DNA-binding protein HU family n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6CGW9_9GAMM
DNA-binding protein HU family
Tax=BJP_IG2102_Gammaproteobacteria_62_140
scnpilot_cont_500_p_scaffold_514_22

Not on your lists

comp(31432..32091)
DNA (660bp) protein (220aa)
Putative uncharacterized protein n=1 Tax=uncultured marine bacterium 106 RepID=Q6SI07_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:AAR37464.1}; TaxID=257383 species="Bacteria; environmental samples.;" source="uncultured marine bacterium 106.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_514_23
endosymbiont of Tevnia jerichonana, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32091..33920)
DNA (1830bp) protein (610aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=2 Tax=sulfur-oxidizing symbionts RepID=G2D9U4_9GAMM
glucosamine 6-phosphate synthase
scnpilot_cont_500_p_scaffold_514_24
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33941..35344)
DNA (1404bp) protein (468aa)
glucosamine-1-phosphate N-acetyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00037AF355
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.
UDP-N-acetylglucosamine pyrophosphorylase
scnpilot_cont_500_p_scaffold_514_25

Not on your lists

comp(35419..35859)
DNA (441bp) protein (147aa)
ATP synthase epsilon chain n=1 Tax=uncultured bacterium RepID=K2AW77_9BACT
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxI
ATP synthase F0F1 subunit epsilon
scnpilot_cont_500_p_scaffold_514_26
Nitrincola sp. AK23, Nitrincola, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35888..36217)
DNA (330bp) protein (110aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit bet
ATP synthase subunit beta n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQH8_NEPCE
ATP synthase F0F1 subunit beta
Displaying 26 items

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