ggKbase home page

GWA2_Bacteroidetes_42_15_gwa2_scaffold_547

Search features with annotation key words

Displaying items 1-30 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWA2_Bacteroidetes_42_15_gwa2_scaffold_547_1
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2..1906)
DNA (1905bp) protein (635aa)
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family id=2140622 bin=GWE2_Bacteroidetes_42_39 species=Methylomicrobium album genus=Methylomicrobium taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
amino acid ABC transporter permease Tax=GWE2_Bacteroidetes_42_39_curated
HisJ; ABC-type amino acid transport/signal transduction system
GWA2_Bacteroidetes_42_15_gwa2_scaffold_547_2
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1918..2703)
DNA (786bp) protein (262aa)
amino acid ABC transporter periplasmic protein Tax=GWE2_Bacteroidetes_42_39_curated
ABC-type amino acid transport/signal transduction systems periplasmic component/domain-like protein id=2140624 bin=GWE2_Bacteroidetes_42_39 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
amino acid ABC transporter periplasmic protein
GWA2_Bacteroidetes_42_15_gwa2_scaffold_547_3
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2854..3990)
DNA (1137bp) protein (379aa)
Lipolytic protein G-D-S-L family id=2140626 bin=GWE2_Bacteroidetes_42_39 species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
lysophospholipase L1-like esterase Tax=GWE2_Bacteroidetes_42_39_curated
hydrolase GDSL
GWA2_Bacteroidetes_42_15_gwa2_scaffold_547_4
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4289..4873
DNA (585bp) protein (195aa)
RNA polymerase sigma-70 factor id=2140628 bin=GWE2_Bacteroidetes_42_39 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1 Tax=GWE2_Bacteroidetes_42_39_curated
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1
GWA2_Bacteroidetes_42_15_gwa2_scaffold_547_5
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5052..6041
DNA (990bp) protein (330aa)
Uncharacterized protein id=2140630 bin=GWE2_Bacteroidetes_42_39 species=Barnesiella intestinihominis genus=Barnesiella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
sigma factor regulatory protein, FecR/PupR family Tax=GWE2_Bacteroidetes_42_39_curated
iron dicitrate transport regulator FecR
GWA2_Bacteroidetes_42_15_gwa2_scaffold_547_6
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6181..9390
DNA (3210bp) protein (1070aa)
TonB-dependent receptor plug id=4748881 bin=GWA2_Bacteroidetes_42_15 species=Spirosoma linguale genus=Spirosoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
TonB-dependent receptor plug Tax=GWE2_Bacteroidetes_42_39_curated
TonB-dependent receptor plug
GWA2_Bacteroidetes_42_15_gwa2_scaffold_547_7
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9435..11099
DNA (1665bp) protein (555aa)
Uncharacterized protein id=2140634 bin=GWE2_Bacteroidetes_42_39 species=Fibrella aestuarina genus=Fibrella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein Tax=GWE2_Bacteroidetes_42_39_curated
hypothetical protein
GWA2_Bacteroidetes_42_15_gwa2_scaffold_547_8
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11320..13530
DNA (2211bp) protein (737aa)
hypothetical protein SpalD1_17131 id=4748883 bin=GWA2_Bacteroidetes_42_15 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
hypothetical protein Tax=GWE2_Bacteroidetes_42_39_curated
hypothetical protein
GWA2_Bacteroidetes_42_15_gwa2_scaffold_547_9
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13551..15128
DNA (1578bp) protein (526aa)
Putative uncharacterized protein id=2140687 bin=GWE2_Bacteroidetes_42_39 species=Alistipes indistinctus genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
Putative uncharacterized protein Tax=GWE2_Bacteroidetes_42_39_curated
GWA2_Bacteroidetes_42_15_gwa2_scaffold_547_10
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15082..15774
DNA (693bp) protein (231aa)
Putative uncharacterized protein id=2140687 bin=GWE2_Bacteroidetes_42_39 species=Alistipes indistinctus genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
Putative uncharacterized protein Tax=GWE2_Bacteroidetes_42_39_curated
GWA2_Bacteroidetes_42_15_gwa2_scaffold_547_11
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15870..17231
DNA (1362bp) protein (454aa)
Tat pathway signal sequence domain protein id=2140690 bin=GWE2_Bacteroidetes_42_39 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
oxidoreductase domain-containing protein Tax=GWE2_Bacteroidetes_42_39_curated
hypothetical protein
GWA2_Bacteroidetes_42_15_gwa2_scaffold_547_12
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17283..18026
DNA (744bp) protein (248aa)
Putative uncharacterized protein id=2140693 bin=GWE2_Bacteroidetes_42_39 species=Algoriphagus machipongonensis genus=Algoriphagus taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
Putative uncharacterized protein Tax=GWE2_Bacteroidetes_42_39_curated
GWA2_Bacteroidetes_42_15_gwa2_scaffold_547_13
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18169..19317
DNA (1149bp) protein (383aa)
Uncharacterized protein id=2140697 bin=GWE2_Bacteroidetes_42_39 species=Bacteroides nordii genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein Tax=GWE2_Bacteroidetes_42_39_curated
hypothetical protein
GWA2_Bacteroidetes_42_15_gwa2_scaffold_547_14
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19440..19562
DNA (123bp) protein (41aa)
id=2140699 bin=GWE2_Bacteroidetes_42_39 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
id=2140699 Tax=GWE2_Bacteroidetes_42_39_curated
GWA2_Bacteroidetes_42_15_gwa2_scaffold_547_15
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20206..22443)
DNA (2238bp) protein (746aa)
Uncharacterized protein id=2140700 bin=GWE2_Bacteroidetes_42_39 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
Beta galactosidase Tax=GWE2_Bacteroidetes_42_39_curated
Alpha-galactosidase precursor
GWA2_Bacteroidetes_42_15_gwa2_scaffold_547_16
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22558..23565)
DNA (1008bp) protein (336aa)
Uncharacterized protein id=2140702 bin=GWE2_Bacteroidetes_42_39 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
rhamnose-proton symporter Tax=GWE2_Bacteroidetes_42_39_curated
rhamnose-proton symporter
GWA2_Bacteroidetes_42_15_gwa2_scaffold_547_17
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23567..24577)
DNA (1011bp) protein (337aa)
Putative uncharacterized protein id=2140704 bin=GWE2_Bacteroidetes_42_39 species=unknown genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein Tax=GWE2_Bacteroidetes_42_39_curated
hypothetical protein
GWA2_Bacteroidetes_42_15_gwa2_scaffold_547_18
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24632..25714)
DNA (1083bp) protein (361aa)
Cis,cis-muconate lactonizing enzyme I id=2140706 bin=GWE2_Bacteroidetes_42_39 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
Cis,cis-muconate lactonizing enzyme I Tax=GWE2_Bacteroidetes_42_39_curated
Cis,cis-muconate lactonizing enzyme I
GWA2_Bacteroidetes_42_15_gwa2_scaffold_547_19
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25725..26759)
DNA (1035bp) protein (345aa)
Oxidoreductase domain protein id=2140708 bin=GWE2_Bacteroidetes_42_39 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
oxidoreductase domain-containing protein Tax=GWE2_Bacteroidetes_42_39_curated
oxidoreductase domain-containing protein
GWA2_Bacteroidetes_42_15_gwa2_scaffold_547_20
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26749..27519)
DNA (771bp) protein (257aa)
creatininase family protein; K01470 creatinine amidohydrolase [EC:3.5.2.10] Tax=GWE2_Bacteroidetes_42_39_curated
Creatininase family protein id=2140709 bin=GWE2_Bacteroidetes_42_39 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
creatininase family protein
GWA2_Bacteroidetes_42_15_gwa2_scaffold_547_21
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27669..28598)
DNA (930bp) protein (310aa)
Transcriptional regulator, AraC family id=2140710 bin=GWE2_Bacteroidetes_42_39 species=Dictyoglomus turgidum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
AraC family transcriptional regulator Tax=GWE2_Bacteroidetes_42_39_curated
AraC family transcriptional regulator
GWA2_Bacteroidetes_42_15_gwa2_scaffold_547_22
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28727..29314
DNA (588bp) protein (196aa)
Integrase catalytic subunit (Fragment) id=2140711 bin=GWE2_Bacteroidetes_42_39 species=Pontibacter sp. BAB1700 genus=Pontibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
Integrase catalytic region Tax=GWE2_Bacteroidetes_42_39_curated
Integrase catalytic region
GWA2_Bacteroidetes_42_15_gwa2_scaffold_547_23
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29830..31617
DNA (1788bp) protein (596aa)
Uncharacterized protein id=4748926 bin=GWA2_Bacteroidetes_42_15 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
Uncharacterized protein Tax=GWE2_Bacteroidetes_42_39_curated
GWA2_Bacteroidetes_42_15_gwa2_scaffold_547_24
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31711..32298
DNA (588bp) protein (196aa)
ECF subfamily RNA polymerase sigma-24 factor id=4007831 bin=GWF2_Bacteroidetes_42_66 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=GWE2_Bacteroidetes_42_39_curated
RNA polymerase subunit sigma-24
GWA2_Bacteroidetes_42_15_gwa2_scaffold_547_25
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32361..33329
DNA (969bp) protein (323aa)
anti-sigma factor id=2140714 bin=GWE2_Bacteroidetes_42_39 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein Tax=GWE2_Bacteroidetes_42_39_curated
hypothetical protein
GWA2_Bacteroidetes_42_15_gwa2_scaffold_547_26
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33441..36947
DNA (3507bp) protein (1169aa)
Putative uncharacterized protein id=2140715 bin=GWE2_Bacteroidetes_42_39 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
outer membrane protein Tax=GWE2_Bacteroidetes_42_39_curated
putative outer membrane protein
GWA2_Bacteroidetes_42_15_gwa2_scaffold_547_27
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36980..38677
DNA (1698bp) protein (566aa)
Putative uncharacterized protein id=4748930 bin=GWA2_Bacteroidetes_42_15 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
outer membrane protein Tax=GWE2_Bacteroidetes_42_39_curated
putative outer membrane protein probably involved in nutrient binding
GWA2_Bacteroidetes_42_15_gwa2_scaffold_547_28
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38710..39828
DNA (1119bp) protein (373aa)
Putative uncharacterized protein id=2140717 bin=GWE2_Bacteroidetes_42_39 species=Bacteroides oleiciplenus genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
putative lipoprotein Tax=GWE2_Bacteroidetes_42_39_curated
putative lipoprotein
GWA2_Bacteroidetes_42_15_gwa2_scaffold_547_29
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40193..41248
DNA (1056bp) protein (352aa)
Uncharacterized protein id=4007837 bin=GWF2_Bacteroidetes_42_66 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
hypothetical protein Tax=GWE2_Bacteroidetes_42_39_curated
hypothetical protein
GWA2_Bacteroidetes_42_15_gwa2_scaffold_547_30
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41265..41927
DNA (663bp) protein (221aa)
Hpt sensor hybrid histidine kinase id=4748934 bin=GWA2_Bacteroidetes_42_15 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
two component regulator propeller domain-containing protein Tax=GWE2_Bacteroidetes_42_39_curated
Displaying items 1-30 of 108 in total

View Taxonomy