ggKbase home page

GWB1_OD1_49_6_GWB1_scaffold_2009

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWB1_OD1_49_6_GWB1_scaffold_2009_1
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

comp(203..961)
-----------------
DNA (759bp)
protein (253aa)
map; methionine aminopeptidase, type I (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18] Tax=GWB1_OD1_49_6_curated
map; methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Dehalococcoides ethenogenes (strain 195) RepID=Q3Z959_DEHE1
GWB1_OD1_49_6_GWB1_scaffold_2009_2
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

comp(930..1616)
-----------------
DNA (687bp)
protein (229aa)
adenylate kinase (EC:2.7.4.3); K00939 adenylate kinase [EC:2.7.4.3] Tax=GWB1_OD1_49_6_curated
adk; adenylate kinase (EC:2.7.4.3); K00939 adenylate kinase [EC:2.7.4.3] id=15190529 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
adenylate kinase (EC:2.7.4.3)
GWB1_OD1_49_6_GWB1_scaffold_2009_3
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

1758..2135
-----------------
DNA (378bp)
protein (126aa)
Tax=GWB1_OD1_49_6_curated
GWB1_OD1_49_6_GWB1_scaffold_2009_4
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

2358..2801
-----------------
DNA (444bp)
protein (148aa)
Tax=GWB1_OD1_49_6_curated
GWB1_OD1_49_6_GWB1_scaffold_2009_5
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists


comp(3119..4390)
-----------------
DNA (1272bp)
protein (424aa)
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=GWB1_OD1_49_6_curated
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY id=15190533 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
preprotein translocase subunit SecY
GWB1_OD1_49_6_GWB1_scaffold_2009_6
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists


comp(4674..5084)
-----------------
DNA (411bp)
protein (137aa)
50S ribosomal protein L15 Tax=GWB1_OD1_49_6_curated
50S ribosomal protein L15 id=2824223 bin=GWC1_OD1_38_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
50S ribosomal protein L15
GWB1_OD1_49_6_GWB1_scaffold_2009_7
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists


comp(5084..5590)
-----------------
DNA (507bp)
protein (169aa)
rpsE; 30S ribosomal subunit protein S5 Tax=GWB1_OD1_49_6_curated
rpsE; 30S ribosomal subunit protein S5 id=15190536 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
30S ribosomal protein S5
GWB1_OD1_49_6_GWB1_scaffold_2009_8

Not on your lists


comp(5595..5957)
-----------------
DNA (363bp)
protein (121aa)
50S ribosomal protein L18 n=1 Tax=Weissella ceti NC36 RepID=M5JDR3_9LACT
50S ribosomal protein L18 {ECO:0000313|EMBL:KKW16410.1}; TaxID=1618798 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_50_14.;"
hypothetical protein
GWB1_OD1_49_6_GWB1_scaffold_2009_9
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists


comp(6088..6639)
-----------------
DNA (552bp)
protein (184aa)
rplF; ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=GWB1_OD1_49_6_curated
50S ribosomal protein L6 id=3423188 bin=GWA1_ZB2_49_26 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
rplF; 50S ribosomal protein L6
GWB1_OD1_49_6_GWB1_scaffold_2009_10
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists


comp(6768..7148)
-----------------
DNA (381bp)
protein (127aa)
30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=GWB1_OD1_49_6_curated
MCYN0190; 30S ribosomal protein S8 id=15190539 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
30S ribosomal protein S8
GWB1_OD1_49_6_GWB1_scaffold_2009_11
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

comp(7230..7421)
-----------------
DNA (192bp)
protein (64aa)
Tax=GWB1_OD1_49_6_curated
GWB1_OD1_49_6_GWB1_scaffold_2009_12
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists


comp(7658..8176)
-----------------
DNA (519bp)
protein (173aa)
50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 Tax=GWB1_OD1_49_6_curated
50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 id=15190541 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
50S ribosomal protein L5
GWB1_OD1_49_6_GWB1_scaffold_2009_13

Not on your lists


comp(8181..8486)
-----------------
DNA (306bp)
protein (102aa)
50S ribosomal protein L24 n=1 Tax=Cyanobium sp. PCC 7001 IPR4_9CHRO">RepID=B5IPR4_9CHRO id=133714 bin=ACD81 species=Cyanobium sp. PCC 7001 genus=Cyanobium taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
50S ribosomal protein L24 {ECO:0000313|EMBL:KKW16415.1}; TaxID=1618798 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_50_14.;"
50S ribosomal protein L24
GWB1_OD1_49_6_GWB1_scaffold_2009_14
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists


comp(8617..8985)
-----------------
DNA (369bp)
protein (123aa)
rplN; 50S ribosomal protein L14 Tax=GWB1_OD1_49_6_curated
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 id=15190543 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
rplN; 50S ribosomal protein L14
GWB1_OD1_49_6_GWB1_scaffold_2009_15
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists


comp(8987..9241)
-----------------
DNA (255bp)
protein (85aa)
rpsQ; 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 Tax=GWB1_OD1_49_6_curated
30S ribosomal protein S17 id=2824254 bin=GWC1_OD1_38_17 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
rpsQ; 30S ribosomal protein S17
GWB1_OD1_49_6_GWB1_scaffold_2009_16
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

comp(9238..9444)
-----------------
DNA (207bp)
protein (69aa)
Tax=GWB1_OD1_49_6_curated
GWB1_OD1_49_6_GWB1_scaffold_2009_17
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists


comp(9460..9870)
-----------------
DNA (411bp)
protein (137aa)
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 Tax=GWB1_OD1_49_6_curated
ribosomal protein L16; K02878 large subunit ribosomal protein L16 id=133701 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
rplP; 50S ribosomal protein L16
GWB1_OD1_49_6_GWB1_scaffold_2009_18
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists


comp(9877..10560)
-----------------
DNA (684bp)
protein (228aa)
30S ribosomal protein S3 n=1 Tax=uncultured organism RepID=U3GQ44_9ZZZZ
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=GWB1_OD1_49_6_curated
30S ribosomal protein S3
GWB1_OD1_49_6_GWB1_scaffold_2009_19
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists


comp(10870..11346)
-----------------
DNA (477bp)
protein (159aa)
50S ribosomal protein L22 n=1 Tax=uncultured bacterium RepID=K1XFR3_9BACT
50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 Tax=GWB1_OD1_49_6_curated
50S ribosomal protein L22
GWB1_OD1_49_6_GWB1_scaffold_2009_20

Not on your lists


comp(11391..11717)
-----------------
DNA (327bp)
protein (109aa)
30S ribosomal protein S19 {ECO:0000313|EMBL:KKW16423.1}; TaxID=1618798 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_50_14.;"
Ribosomal protein S19 id=3736630 bin=GWC2_OD1_43_27 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
30S ribosomal protein S19
GWB1_OD1_49_6_GWB1_scaffold_2009_21
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists


comp(11943..12764)
-----------------
DNA (822bp)
protein (274aa)
rplB; 50S ribosomal protein L2 Tax=GWB1_OD1_49_6_curated
rplB; 50S ribosomal protein L2 id=15190550 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
rplB; 50S ribosomal protein L2
GWB1_OD1_49_6_GWB1_scaffold_2009_22
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists


comp(12767..13042)
-----------------
DNA (276bp)
protein (92aa)
50S ribosomal protein L25; K02892 large subunit ribosomal protein L23 Tax=GWB1_OD1_49_6_curated
50S ribosomal protein L25; K02892 large subunit ribosomal protein L23 id=15190551 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
50S ribosomal protein L25
GWB1_OD1_49_6_GWB1_scaffold_2009_23
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists


comp(13039..13689)
-----------------
DNA (651bp)
protein (217aa)
50S ribosomal protein L4 n=1 Tax=uncultured bacterium RepID=K1X257_9BACT
50S ribosomal protein L4P; K02926 large subunit ribosomal protein L4 Tax=GWB1_OD1_49_6_curated
50S ribosomal protein L4P
GWB1_OD1_49_6_GWB1_scaffold_2009_24
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists


comp(13856..14413)
-----------------
DNA (558bp)
protein (186aa)
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 Tax=GWB1_OD1_49_6_curated
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 id=15190553 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
50S ribosomal protein L3
GWB1_OD1_49_6_GWB1_scaffold_2009_25
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

comp(14765..14869)
-----------------
DNA (105bp)
protein (35aa)
Tax=GWB1_OD1_49_6_curated
GWB1_OD1_49_6_GWB1_scaffold_2009_26
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

comp(15019..16065)
-----------------
DNA (1047bp)
protein (349aa)
RNA-directed DNA polymerase Tax=GWB1_OD1_49_6_curated
RNA-directed DNA polymerase id=4530225 bin=GWF2_Firmicute_51_9 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWF2_Firmicute_51_9 organism_group=Firmicute
RNA-directed DNA polymerase
GWB1_OD1_49_6_GWB1_scaffold_2009_27
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

16122..16439
-----------------
DNA (318bp)
protein (106aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-N16 RepID=UPI0003B51DE8
hypothetical protein Tax=GWB1_OD1_49_6_curated
GWB1_OD1_49_6_GWB1_scaffold_2009_28
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

comp(16451..16624)
-----------------
DNA (174bp)
protein (58aa)
Tax=GWB1_OD1_49_6_curated
GWB1_OD1_49_6_GWB1_scaffold_2009_29
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

comp(16925..17551)
-----------------
DNA (627bp)
protein (209aa)
Tax=GWB1_OD1_49_6_curated
Displaying 29 items

View Taxonomy