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scnpilot_cont_500_p_scaffold_564

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_564_1
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..5958)
DNA (5958bp) protein (1986aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002FE3DE0 rbh
Uncharacterized protein {ECO:0000313|EMBL:EJL78312.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="P
hypothetical protein
scnpilot_cont_500_p_scaffold_564_2
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6370..7089)
DNA (720bp) protein (240aa)
Response regulator 4 n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0FAB5_9BURK
chemotaxis protein CheY
Tax=BJP_IG2103_Rhodocyclales_63_50
scnpilot_cont_500_p_scaffold_564_3
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7255..9423
DNA (2169bp) protein (723aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Va
Two component transcriptional regulator, sensor histidine kinase n=1 Tax=Variovorax paradoxus B4 RepID=T1XGY3_VARPD rbh
two component transcriptional regulator, sensor histidine kinase
scnpilot_cont_500_p_scaffold_564_4
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9538..10947)
DNA (1410bp) protein (470aa)
FAD-linked oxidase n=1 Tax=Cupriavidus sp. WS RepID=UPI00037B352A rbh
FAD-linked oxidase {ECO:0000313|EMBL:KDP89184.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
D-2-hydroxyglutarate dehydrogenase
scnpilot_cont_500_p_scaffold_564_5
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11096..12130)
DNA (1035bp) protein (345aa)
4-hydroxy-2-oxovalerate aldolase 3 {ECO:0000255|HAMAP-Rule:MF_01656}; Short=HOA 3 {ECO:0000255|HAMAP-Rule:MF_01656};; EC=4.1.3.39 {ECO:0000255|HAMAP-Rule:MF_01656};; 4-hydroxy-2-keto-pentanoic acid al
4-hyroxy-2-oxovalerate aldolase n=1 Tax=Azoarcus toluclasticus RepID=UPI00035CA751 rbh
pyruvate carboxyltransferase
scnpilot_cont_500_p_scaffold_564_6
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12141..13049)
DNA (909bp) protein (303aa)
mhpF; acetaldehyde dehydrogenase (EC:1.2.1.10)
Acetaldehyde dehydrogenase 2/3 n=1 Tax=Azoarcus sp. (strain BH72) RepID=ACDH2_AZOSB rbh
Tax=BJP_IG2103_Rhodocyclales_63_50
scnpilot_cont_500_p_scaffold_564_7
Pseudomonas frederiksbergensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13074..14471)
DNA (1398bp) protein (466aa)
transporter n=1 Tax=Pseudomonas putida RepID=UPI0003065380 rbh
Transporter {ECO:0000313|EMBL:KHK61780.1}; TaxID=104087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas frederiksbergensis
hypothetical protein
scnpilot_cont_500_p_scaffold_564_8
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14782..16410
DNA (1629bp) protein (543aa)
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Thauera aminoaromatica S2 RepID=N6YBL6_9RHOO
PAS/PAC sensor signal transduction histidine kinase
Tax=BJP_IG2103_Rhodocyclales_63_50
scnpilot_cont_500_p_scaffold_564_9
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16407..17030
DNA (624bp) protein (208aa)
Two-component response regulator n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P919_AROAE
two-component response regulator
Two-component response regulator {ECO:0000313|EMBL:CAI06190.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aro
scnpilot_cont_500_p_scaffold_564_10
Acinetobacter baumannii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17934..18773)
DNA (840bp) protein (280aa)
Uncharacterized protein n=17 Tax=Acinetobacter baumannii RepID=B0V6K3_ACIBY rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGJ64087.1}; TaxID=592014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/b
scnpilot_cont_500_p_scaffold_564_11
Halomonas sp. BC04, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19578..21824
DNA (2247bp) protein (749aa)
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri (strain ATCC 17588 / DSM 5190 / CCUG 11256 / JCM 5965 / LMG 11199 / NCIMB 11358 / Stanier 221) RepID=F8H5P0_PSEUT rbh
Uncharacterized protein {ECO:0000313|EMBL:EWH01912.1}; TaxID=1403540 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. BC04.
hypothetical protein
scnpilot_cont_500_p_scaffold_564_12
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21907..22116
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Thauera sp. 63 RepID=N6Y3R3_9RHOO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ENO74699.1}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
scnpilot_cont_500_p_scaffold_564_13
Thauera sp. MZ1T, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22125..23018)
DNA (894bp) protein (298aa)
Transcriptional regulator, LysR family n=1 Tax=Thauera sp. (strain MZ1T) RepID=C4ZNE2_THASP rbh
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACK53789.1}; TaxID=85643 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. (
scnpilot_cont_500_p_scaffold_564_14
Janthinobacterium sp. Marseille, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23616..24986)
DNA (1371bp) protein (457aa)
Outer membrane efflux protein n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6T3S1_JANMA rbh
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:ABR89418.1}; TaxID=375286 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthin
scnpilot_cont_500_p_scaffold_564_15
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24983..26944)
DNA (1962bp) protein (654aa)
Macrolide export ATP-binding/permease protein MacB {ECO:0000256|HAMAP-Rule:MF_01720}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01720};; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria
phosphonate-transporting ATPase (EC:3.6.3.28)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI00036A106A rbh
scnpilot_cont_500_p_scaffold_564_16
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26941..28119)
DNA (1179bp) protein (393aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI000368EC94 rbh
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:ENO88781.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera
macrolide-specific efflux protein macA
scnpilot_cont_500_p_scaffold_564_17
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28214..28531)
DNA (318bp) protein (106aa)
Membrane protein n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F6P8_9BURK
Membrane protein {ECO:0000313|EMBL:EZP46295.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp
hypothetical protein
scnpilot_cont_500_p_scaffold_564_18
Pseudomonas fulva, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28528..28830)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J0KJN3_9BURK
Strain MEJ086 contig_79, whole genome shotgun sequence {ECO:0000313|EMBL:KIP93879.1}; TaxID=47880 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
hypothetical protein
scnpilot_cont_500_p_scaffold_564_19
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28827..30419)
DNA (1593bp) protein (531aa)
Putative iron-regulated membrane protein n=1 Tax=Acidovorax sp. CF316 RepID=J1EGG4_9BURK rbh
Putative iron-regulated membrane protein {ECO:0000313|EMBL:EJE51401.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovo
PepSY-associated TM helix domain protein precursor
scnpilot_cont_500_p_scaffold_564_20
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30475..32979)
DNA (2505bp) protein (835aa)
TonB-dependent siderophore receptor n=1 Tax=Methylovorus sp. (strain SIP3-4) RepID=C6XBW9_METSD
TonB-dependent siderophore receptor
TonB-dependent siderophore receptor {ECO:0000313|EMBL:ACT50044.1}; TaxID=582744 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methyl
scnpilot_cont_500_p_scaffold_564_21
unknown

Not on your lists

comp(33025..33237)
DNA (213bp) protein (71aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_564_22
Alcanivorax pacificus, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33458..33796
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Alcanivorax pacificus W11-5 RepID=K2GYR8_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJD48548.1}; TaxID=391936 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax paci
scnpilot_cont_500_p_scaffold_564_23
Alcanivorax pacificus, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33747..34259
DNA (513bp) protein (171aa)
N-acetyltransferase GCN5 n=1 Tax=Alcanivorax pacificus W11-5 RepID=K2HID2_9GAMM
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:AJD48547.1}; TaxID=391936 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax pacificus
Displaying 23 items

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