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GWF1_Sphingobium_63_6_gwf1_scaffold_1925_10

Organism: Sphingomonadales bacterium GWF1_63_6

near complete RP 46 / 55 MC: 3 BSCG 48 / 51 MC: 2 ASCG 12 / 38
Location: 11540..12331

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase specialized sigma subunit, sigma24-like n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MWX4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 94.7
  • Coverage: 263.0
  • Bit_score: 486
  • Evalue 1.50e-134
Phyllosphere-induced regulator PhyR {ECO:0000313|EMBL:EXS71771.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sph similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 263.0
  • Bit_score: 506
  • Evalue 2.00e-140
CheY-like response regulator similarity KEGG
DB: KEGG
  • Identity: 90.9
  • Coverage: 265.0
  • Bit_score: 463
  • Evalue 3.00e-128

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Taxonomy

Sphingobium sp. Ant17 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 792
ATGTCGCTTGGACAGCAACTACACCCCCATCTTCCATTCCTGCGTCGCTACGCCCGCGCGCTCACGGGCAGCCAAACGCATGGCGACGCTTATGTTCGCGCCTCGCTCGAAGCGATCGTCGCTGCACCGGAAGAATTTCCATCTGACGTCGATCCGCGCCTTGGTCTGTATCGGACGTTTCATGCCATCTGGTCGTCGGCCCATCTCGAAGATGTGCCACTGACTGCCGACGGCGACCGGGAAGCGATTGCGCAGGCACGCCTGGCGCGCCTGACGCCTTTGCCGCGCCAGGCTTTGCTGTTGACCGCGTTGGAGGGCTTTACCGTTGAGGATGTCGCCTATCTCATCGACCTCGACAGCGCTGATGTAGAAGGCCTGGTCGAAGAGGCGCTGAGTGAAATCGAGGCGCAGACTCGGGCCAAGGTGCTGATCATCGAGGATGAGCCGATCATTGCGATGGACATCGAAACGATCGTTCGCGACCTTGGTCATGATGTGACTGCAATTGCCGTGACCGCTGAAGACGCGGTGCGCGAGGCGCTGGCGGATCGTCCAGGGCTTGTGTTGGCCGACATCCAACTGGCCGATGACAGCAGCGGCATTGACGCCGTGAAGGATATCCTTGCTGAATTTGCCGTGCCGGTCATCTTCATCACGGCCTTCCCCGAACGCCTGTTGACCGGGGAGCGGCCCGAACCGACGTTCCTGATCACCAAGCCGTTCCAGCGTTCGACCGTGAAGGCCGCCATTTCGCAGGCGCTCTTCTTCGACCAGGCGACCGCGCCAGCATGA
PROTEIN sequence
Length: 264
MSLGQQLHPHLPFLRRYARALTGSQTHGDAYVRASLEAIVAAPEEFPSDVDPRLGLYRTFHAIWSSAHLEDVPLTADGDREAIAQARLARLTPLPRQALLLTALEGFTVEDVAYLIDLDSADVEGLVEEALSEIEAQTRAKVLIIEDEPIIAMDIETIVRDLGHDVTAIAVTAEDAVREALADRPGLVLADIQLADDSSGIDAVKDILAEFAVPVIFITAFPERLLTGERPEPTFLITKPFQRSTVKAAISQALFFDQATAPA*