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ACD26_38

Alias: ACD26_491311.4493.5

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD26_38_1

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comp(160..354)
DNA (195bp) protein (65aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
transmembrane_regions (db=TMHMM db_id=tmhmm from=40 to=62)
Uncharacterized protein {ECO:0000313|EMBL:EKD94300.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD26_38_2

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comp(663..971)
DNA (309bp) protein (103aa)
DNA polymerase subunit beta
DNA polymerase beta domain protein region n=1 Tax=Roseiflexus castenholzii DSM 13941 RepID=A7NQW0_ROSCS (db=UNIREF evalue=6.0e-09 bit_score=63.2 identity=34.26 coverage=98.0582524271845)
Nucleotidyltransferase (db=superfamily db_id=SSF81301 from=2 to=102 evalue=3.6e-14)
NTP_transf_2 (db=HMMPfam db_id=PF01909 from=21 to=72 evalue=3.1e-10 interpro_id=IPR002934 interpro_description=Nucleotidyl transferase domain GO=Molecular Function: nucleotidyltransferase activity (GO:0016779))
ACD26_38_3

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comp(941..1165)
DNA (225bp) protein (75aa)
HEPN (db=HMMPfam db_id=PF05168 from=2 to=70 evalue=1.9e-08 interpro_id=IPR007842 interpro_description=HEPN)
HEPN (db=ProfileScan db_id=PS50910 from=1 to=63 evalue=10.174 interpro_id=IPR007842 interpro_description=HEPN)
Uncharacterized protein {ECO:0000313|EMBL:EKD94299.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD26_38_4

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1548..2522
DNA (975bp) protein (325aa)
seg (db=Seg db_id=seg from=239 to=250)
coiled-coil (db=Coil db_id=coil from=251 to=272 evalue=NA)
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=2 to=132 evalue=1.2e-08)
PRTase-like (db=superfamily db_id=SSF53271 from=172 to=300 evalue=1.2e-06)
ACD26_38_5

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2602..3000
DNA (399bp) protein (133aa)
nucleotidyltransferase
Nucleotidyltransferase (db=superfamily db_id=SSF81301 from=2 to=106 evalue=3.7e-12)
NTP_transf_2 (db=HMMPfam db_id=PF01909 from=13 to=101 evalue=6.5e-08 interpro_id=IPR002934 interpro_description=Nucleotidyl transferase domain GO=Molecular Function: nucleotidyltransferase activity (GO:0016779))
no description (db=Gene3D db_id=G3DSA:3.30.460.10 from=5 to=115 evalue=0.00071)
ACD26_38_6

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2997..3278
DNA (282bp) protein (94aa)
hypothetical protein
DUF86 (db=HMMPfam db_id=PF01934 from=14 to=91 evalue=1.1e-11 interpro_id=IPR008201 interpro_description=Protein of unknown function DUF86)
Uncharacterized protein {ECO:0000313|EMBL:EKD94293.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Uncharacterized protein n=1 Tax=Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC 100331 / OCM 82 / Marburg) RepID=D9PVT8_METTM
ACD26_38_7

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comp(3637..3735)
DNA (99bp) protein (33aa)
3637..3735 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD94294.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD26_38_8

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comp(3739..3993)
DNA (255bp) protein (85aa)
seg (db=Seg db_id=seg from=38 to=50)
YefM-like (db=superfamily db_id=SSF143120 from=1 to=83 evalue=2.7e-16)
PhdYeFM (db=HMMPfam db_id=PF02604 from=1 to=68 evalue=1.7e-15 interpro_id=IPR006442 interpro_description=Prevent-host-death protein)
phd_fam: prevent-host-death family protein (db=HMMTigr db_id=TIGR01552 from=3 to=56 evalue=1.3e-06 interpro_id=IPR006442 interpro_description=Prevent-host-death protein)
ACD26_38_9

Not on your lists

comp(4039..4158)
DNA (120bp) protein (40aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
Uncharacterized protein {ECO:0000313|EMBL:EKD94296.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD26_38_10

Not on your lists

comp(4145..4336)
DNA (192bp) protein (64aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
transmembrane_regions (db=TMHMM db_id=tmhmm from=31 to=53)
seg (db=Seg db_id=seg from=31 to=56)
Uncharacterized protein {ECO:0000313|EMBL:EKD94297.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 10 items

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