ggKbase home page

RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_19628_2

Organism: Deltaproteobacteria bacterium RBG_13_58_19

partial RP 39 / 55 MC: 1 BSCG 39 / 51 ASCG 9 / 38
Location: 638..2365

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NIX3_DESAR similarity UNIREF
DB: UNIREF100
  • Identity: 55.1
  • Coverage: 579.0
  • Bit_score: 573
  • Evalue 2.70e-160
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=RBG_13_Deltaproteobacteria_58_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 575.0
  • Bit_score: 1121
  • Evalue 0.0
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 55.1
  • Coverage: 579.0
  • Bit_score: 573
  • Evalue 7.70e-161

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_13_Deltaproteobacteria_58_19_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1728
ATGAGCAACGGTATGGGTATGGATGGTTTCCCGGAAATTATGCCGATGGGGGACGATGATAACCTGATTCCCGTAAACGATCTGGATGATTCCCTCTCTCCCAATTGTTACATCGCCGAACCGGCCAAAGATATCCTGATCTTTGAGGAATTGGACCTCTCCAACGGGGAAGTTTCCCACAGCCTGGCCCTGGCCGCTTCCATAGAAATGGAGGAGACGGAAGGGGACCTGGCTCTGGACCCGGAGGCCAGTACCAAGCTGGATGACCCGGTGCGGCTTTATCTAAAAGAGATGGGCATGGTCTCTCTCCTCACCCGGGAAGGGGAGGTGGAGATCGCCAAGCGCATCGAAGAAGGGGAAAAAGAGGTTCTCCAGGCCTTTACGGAAGTTCCCTGGGCTTTCCAGGGAATCATGGCCCTGGTGAACCGCTGGGAGCAAGAGAAATTATCTCCGGAGAGCGTCCTGGACAATTTCGGCGAAGATGACCCGGATTTAGACCACCCTACCCATAAGTCCCGCGTTCTCAAAAGTATTCAGAAATTGCGGGCCCAGGCGGAACGCTTGCAGGAAGCCCAGAAAGAATGGGCCACGGTCCGGAACCAGAAAGAAGACCGGGAACAATTGGAAAAGAACATTGCCGCCATGCGGCGCCGCATCGTGGATTGCCTGAAGGGCCTGCGCCTGGAGAGCCATCACCTGGAGGACATCCGCCTCGTCCTGGCCAAGTTCGGGCGGGCCTTTAGGGAAAGTCAACACAAAATCCAGAAATCCCTGGGGGAAGCCGGGCTGTCCCTCACTAAATACAGGTCTCTGGCCCGTGATCTAAAAAACGGGCTAGCCGCCGAACCGCCTGCCGGTCTCTCCGAAACCCGCTTAAAGCACCTGGAAGAAGTGGTGGTCCAGAATCAGAAGCGCCAGAGAAGCCTGGAAAAAGAGGTGGGCCTGACCGGTCACCGCTTACTGGCGGTCCTGGCCCGGATGGACAAGGGGGAGTATCAGGCCGAGAAAGCCAAACGGGAATTGGTGGAAGCCAACCTGCGCCTGGTGGTGAGCATCGCCAAGAAATACACCAATCGGGGCCTGCAATTTTTGGATCTGATCCAGGAAGGCAACATCGGCCTCATGAAGGCGGTGGAAAAGTTTGAATATGAACGGGGCTATAAGTTCAGCACCTATGCCACCTGGTGGATCCGCCAGGCCATCACCCGGGCCATTGCCGACCAGGCCCGGACCATTCGCATCCCCGTCCATATGATCGAGACTATTAATAAATTGATTCGCACCTCCCGCTATTTAGTCCAGGAAATCGGCCGGGAGCCCACCCCGGAGGAGATCGCCGAGAAGATGGAATTCCCCCTGGAAAAGGTGCGCAAGGTCCTGAAAATCGCCAAGGAACCCCTGTCCCTGGAGATGCCCATCGGCGACGAAGAAGACAGCCACCTGGGGGATTTCATCGAAGATAAAAAGATCTTTACGCCCATGGAAGCGGTGGCGAACCTCAATTTGGCGGAGCAGACCAGCAAGATGCTGGCCACTCTCACCCCCCGGGAAGAAAAGGTGCTGCGCAAACGTTTCGGCATCGGCGAGAAGACCGACCATACCTTGGAAGAAGTGGGGCGGGATTTCGAAGTGACCCGGGAACGCATCCGCCAGATAGAAGCCAAAGCCCTGAGGAAACTGCGCCACCCCTCCCGGAGCACCCGGTTGAAAAGCTTTATCGAATCATAA
PROTEIN sequence
Length: 576
MSNGMGMDGFPEIMPMGDDDNLIPVNDLDDSLSPNCYIAEPAKDILIFEELDLSNGEVSHSLALAASIEMEETEGDLALDPEASTKLDDPVRLYLKEMGMVSLLTREGEVEIAKRIEEGEKEVLQAFTEVPWAFQGIMALVNRWEQEKLSPESVLDNFGEDDPDLDHPTHKSRVLKSIQKLRAQAERLQEAQKEWATVRNQKEDREQLEKNIAAMRRRIVDCLKGLRLESHHLEDIRLVLAKFGRAFRESQHKIQKSLGEAGLSLTKYRSLARDLKNGLAAEPPAGLSETRLKHLEEVVVQNQKRQRSLEKEVGLTGHRLLAVLARMDKGEYQAEKAKRELVEANLRLVVSIAKKYTNRGLQFLDLIQEGNIGLMKAVEKFEYERGYKFSTYATWWIRQAITRAIADQARTIRIPVHMIETINKLIRTSRYLVQEIGREPTPEEIAEKMEFPLEKVRKVLKIAKEPLSLEMPIGDEEDSHLGDFIEDKKIFTPMEAVANLNLAEQTSKMLATLTPREEKVLRKRFGIGEKTDHTLEEVGRDFEVTRERIRQIEAKALRKLRHPSRSTRLKSFIES*