ggKbase home page

RBG_16_DPX2_64_85_RBG_16_scaffold_3194_18

Organism: Deltaproteobacteria bacterium RBG_16_64_85

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: 12964..14583

Top 3 Functional Annotations

Value Algorithm Source
Fis family transcriptional regulator; K02584 Nif-specific regulatory protein Tax=RBG_16_Deltaproteobacteria_64_85_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 539.0
  • Bit_score: 1052
  • Evalue 0.0
Transcriptional regulator, NifA subfamily, Fis Family id=4555860 bin=GWC2_Proteo_65_14_Ab886 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 81.0
  • Coverage: 532.0
  • Bit_score: 847
  • Evalue 9.20e-243
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 45.7
  • Coverage: 521.0
  • Bit_score: 458
  • Evalue 3.40e-126

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Deltaproteobacteria_64_85_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1620
GTGAACCATCGTCGCTCCCCGGAAAAGGCGGAGCTCTCCGCCATTTACGAAGTGGGGAAAATCCTCACATCCACGCAGAACCTCCCCCGTGCCCTGGGAATCTCCCTGCGGACCCTTCAGAGCTTCCTCGGTTTCGACCGCGCCGCGATCCACCTCCCCGACGCCGCGACGAGGGAGATCCGGATGGAGGTGGCCGCCGGCTACACGGCCGAGGAGCGCGGCCGCGCGCGCTACGTGTGGGGGGAGGGAATCGTCGGGAAGACGATGAAATCGGGGGGGCCGATCGCCATCCCGGACATCCGGCAGGAGCCTTCGTTCCTGGACAAGACGCGCGCGCACGGGAAGACGCAGGAGGGCCTCCTTTCCTACATCTCCGTCCCCTTGAAGATCGGCGCCGAGGTGCTCGGCGTGCTGACCGCGGAGCGGATCGGCCGGGCCGGGACCCAGGCGCTGGAGGCGGACACGCGCACCCTGATGGTCATCGGATGCCTCATCGGCCAGGCGCTCAAGCTCCACGCAGCGATCGACCGCCTGCAGGAGGAGTTCCAGCGGCAACGGCAGGAGTTCGAGAAGACGATCCGGAAGACGTACCGGATCGAGAACATCGTCGGGCAGAGCAAGCGGATGCAGGAGGTCTTCGCCTCGGTGACCAGCGTCGCCCCCTCCCGCGCGACGGTCCTGGTGCGCGGAGAGAGCGGCACCGGAAAGGAGAGGATCGCAAGGGCGATCCACCTCGCGGGCCATCGCGCCGAGCGCCCCTTCGTTACGGTCAACTGCGCCGCCCTTCCGGAGACCTTGCTGGAGTCCGAGCTTTTCGGCCACAAGCGGGGGGCCTTCACCGGCGCCATCGAGGAGAGGAAAGGGCGTTTCGAGCAGGCCGCGGGGGGGACGATCTTCCTGGACGAGGCGGGCGACATCCCCCTCCCCACGCAGGTCAAACTGCTGCGCGTCCTGCAGGAGCGGAAGTTCGAGCGGCTGGGGGAGAACAAGACGATCTCCGTGGATGTGCGGATCATCGCCGCCACGAACGCCGACCTGGAGAAGATGGTGGAAGAGGGGCGCTTCCGGGAGGACCTTTTCTACCGCCTGAACGTCATCCCCATCTACCTCCCGCCCCTCCGGGACCGCCGCGAGGACGTCATCCCGCTGACCGAACACTTTTTGGACCGGTTCAACAAGGAGCACGGAAAGACCGTCTCCTTCTCGCCCGAAGTCCTCGACCTGCTGCTCGAGTACCGGTGGCCGGGGAACGTCCGCGAGCTGGAGAACCTCGTCGAGCGTGCGGTGGTCATGGCGAAGTCCCCCGTCGTCCACATTCCCGACCTCCCTCGTCCCGTCCGGACCTTCTCGGCGCAGGAAGCCGACTTGGCGTCTTCAGCGCCCGGCGTCGCGGCGGCGTCGCCCTCCGCATCCCCCGGGCAGGCCGCCGAATCCCCGCCGAGGGCCGAATACCTCCGGGCGATGGAACGGGAAGAGCTGAGGCGGGCGCTGGAGAGCACGGGATGGGTGATCGCCCGCGCGGCGCGAGTGCTCGGCTGGACCCCCCGCCAGGTCGCCTACAAGATGAAAAAGCACTCCCTCTCCTCCCCCTGGAAAACTAAAGCAGGGGGACGTTCTTAA
PROTEIN sequence
Length: 540
VNHRRSPEKAELSAIYEVGKILTSTQNLPRALGISLRTLQSFLGFDRAAIHLPDAATREIRMEVAAGYTAEERGRARYVWGEGIVGKTMKSGGPIAIPDIRQEPSFLDKTRAHGKTQEGLLSYISVPLKIGAEVLGVLTAERIGRAGTQALEADTRTLMVIGCLIGQALKLHAAIDRLQEEFQRQRQEFEKTIRKTYRIENIVGQSKRMQEVFASVTSVAPSRATVLVRGESGTGKERIARAIHLAGHRAERPFVTVNCAALPETLLESELFGHKRGAFTGAIEERKGRFEQAAGGTIFLDEAGDIPLPTQVKLLRVLQERKFERLGENKTISVDVRIIAATNADLEKMVEEGRFREDLFYRLNVIPIYLPPLRDRREDVIPLTEHFLDRFNKEHGKTVSFSPEVLDLLLEYRWPGNVRELENLVERAVVMAKSPVVHIPDLPRPVRTFSAQEADLASSAPGVAAASPSASPGQAAESPPRAEYLRAMEREELRRALESTGWVIARAARVLGWTPRQVAYKMKKHSLSSPWKTKAGGRS*