ggKbase home page

RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_18389_11

Organism: Candidatus Muproteobacteria bacterium RBG_16_65_31

near complete RP 44 / 55 MC: 1 BSCG 44 / 51 MC: 2 ASCG 9 / 38 MC: 3
Location: comp(9476..10270)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A (EC:5.4.99.12); K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 97.7
  • Coverage: 264.0
  • Bit_score: 520
  • Evalue 1.80e-144
tRNA pseudouridine synthase A (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 58.0
  • Coverage: 264.0
  • Bit_score: 311
  • Evalue 1.90e-82
tRNA pseudouridine synthase A n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C3V3_NITHN similarity UNIREF
DB: UNIREF100
  • Identity: 58.0
  • Coverage: 264.0
  • Bit_score: 311
  • Evalue 6.80e-82

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Gamma2_65_16 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 795
ATGCGCATCGCCGCCATTATCGAGTACGACGGCTCCGGCTTTTCCGGCTGGCAGCGGCAGGAGCACGCGCGCTCGGTGCAGGGTGTAGTTGAAGAAGCGTTATCCAAGGTCGCCGACGAGCCGATnnnnnnnnnnCCGATCCAGGCGACCGTCGCCGGGCGCACCGACGCCGGCGTGCACGCGCTGGCGCAGGCGATTCACTTCGATACGAACGCGACACGCAGCGAATACTCCTGGGTGCGCGGGGCGAACAGCAATCTTCCGGACGCCGTAGCCGTCCTGTGGGCCGGAGAAGTGGATGCCGGATTTCACGCGCGCTATTCGGCGACCGGGCGCCATTACCACTACGTAATCCTGAACCGCCCGATAAGGCCGACGTATCTCAGCCGGAGCGTGACCTGGGATTACCGTCTGCTCGATGTCGCGCCCATGCAGAAGGCCGCGCGCCATCTTATAGGCGAGCATGACTTCACTTCGTTCCGCGCCGCCGAGTGCCAGGCGCAGAGCCCGGTGCGCGAGCTGCGCGCGCTCGAAATCAAACGCCACGGCGAGTTCGTGCACATCCGCGCCTATGCCAACGCCTTTCTCCAGCACATGGTGCGCAATATCGCAGGCGTGCTCATGACCATCGGCGCGGGCGAGAAGGAGCCCGGGTGGGCGAAAGAAGTGCTCGCGGCCCGCGACCGCGCGCAGGGCGGCATCACCGCCACTCCCGACGGGCTTTATCTTGCGGAGATCGAGTATCCCGAACACTTCAAGCTCCCGCGGCTTTCGCGGGATGTGGGTCTGTGGTGA
PROTEIN sequence
Length: 265
MRIAAIIEYDGSGFSGWQRQEHARSVQGVVEEALSKVADEPXXXXPIQATVAGRTDAGVHALAQAIHFDTNATRSEYSWVRGANSNLPDAVAVLWAGEVDAGFHARYSATGRHYHYVILNRPIRPTYLSRSVTWDYRLLDVAPMQKAARHLIGEHDFTSFRAAECQAQSPVRELRALEIKRHGEFVHIRAYANAFLQHMVRNIAGVLMTIGAGEKEPGWAKEVLAARDRAQGGITATPDGLYLAEIEYPEHFKLPRLSRDVGLW*