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RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_9167_6

Organism: Candidatus Muproteobacteria bacterium RBG_16_65_31

near complete RP 44 / 55 MC: 1 BSCG 44 / 51 MC: 2 ASCG 9 / 38 MC: 3
Location: 4004..4330

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-54 n=1 Tax=Thiobacillus denitrificans RepID=UPI00037C167F similarity UNIREF
DB: UNIREF100
  • Identity: 52.3
  • Coverage: 107.0
  • Bit_score: 125
  • Evalue 2.90e-26
sigma 54 modulation protein/ribosomal protein S30EA; K05808 putative sigma-54 modulation protein Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 108.0
  • Bit_score: 217
  • Evalue 7.70e-54
ribosomal subunit interface protein similarity KEGG
DB: KEGG
  • Identity: 56.6
  • Coverage: 106.0
  • Bit_score: 128
  • Evalue 1.60e-27

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Taxonomy

R_Gamma2_65_16 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 327
ATGCACATCACGGTAAGCGGCCAGCAGATGGATGTCACCGACACGCTGCGCGACTACGCCTCGGAGAAGATCAGGCGCATCCAGAAGCACTTCGACCACGTGACCAACACCAACGTGGTGCTGCACGTGGAGAAGAACCGGCACCGAGCCGAGGCCACCATCCACGCCAGGGGCGCCACGCTGCACGCCGACGCCGCGGGCGCGGACATGTACGCCGCCATTGACGCGCTCGCCGACAAGCTCGACCGGCAGGTGCTCAAGCACAAGGAGAGGCTCGCCGACCACCAGCGTAACGGTGAATCACTGAAAAAAATGAGAACACTGTAA
PROTEIN sequence
Length: 109
MHITVSGQQMDVTDTLRDYASEKIRRIQKHFDHVTNTNVVLHVEKNRHRAEATIHARGATLHADAAGADMYAAIDALADKLDRQVLKHKERLADHQRNGESLKKMRTL*