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RBG_16_NSX_64_22_RBG_16_scaffold_2885_22

Organism: Nitrospirae bacterium RBG_16_64_22

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(21399..22958)

Top 3 Functional Annotations

Value Algorithm Source
rpoN; RNA polymerase sigma-54 factor; K03092 RNA polymerase sigma-54 factor Tax=RBG_16_Nitrospirae_64_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 519.0
  • Bit_score: 1018
  • Evalue 4.10e-294
RNA polymerase sigma-54 factor id=2455841 bin=GWC2_Nitrospirae-rel_56_14 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA similarity UNIREF
DB: UNIREF100
  • Identity: 49.6
  • Coverage: 506.0
  • Bit_score: 468
  • Evalue 8.60e-129
rpoN; RNA polymerase sigma-54 factor similarity KEGG
DB: KEGG
  • Identity: 45.0
  • Coverage: 504.0
  • Bit_score: 422
  • Evalue 2.00e-115

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Taxonomy

RBG_16_Nitrospirae_64_22_curated → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 1560
GTGGCTCTTGAAGCGCGTCTCGATCTGAAGCTTTCGCAGAAGTTGATCATGACGCCACAGCTCCAGCTGGCGATCCGGCTTCTCCGTCTCTCGCACCTCGAGTTGACGGAGGCCATTACGCAGGAGCTGACGGAGAACCCGTGCCTCGAGGAGACCGCGATCGAGTTGGAGGAGGGCGACGCGGTCGCTGAGAAGACGGAGGACGCCGCCGAGGGAGAAAGCGAGTCATCGGCCGAACGGGAAGCGCCGGGGGGAGAGGCGGGAGAAGACGGGGCGGGGAGCGCGGCTGGGGTCGAGGGCGGTCGGAGCGACGAGAGCGATGCTCCCATCATTGAAACCCGGTGGGACGAGTATTTCGAGGAACGGGCGAGCGACGGGCGGGACCTCGGATACATGGGGCCGGACCGGGACGAGGATCTGCCGTCGTACGACCGCACGCTGGCGAACCGGGAGACTCTGACCGATCACCTGCTCTGGCAGGTGCGGCTCACGGAGGCGAGCCCGTCCCAGCGCGAGGCTTGCGAGGCCGTCATCGGGAACCTGGATGAAAACGGCTACCTCGATGCTTCCGTGGAGGACCTGGTCAAGCTGACGGGACAGAATCCGGAAGAGATCGAGGCGGCCATCCGCGTCGTCCAGGGGTTCGATCCGCCGGGAGTCGGCGCCCGGACGCTGGCCGAATGCCTCCTTCTCCAGCTTCCCGCGCTCGGTCTTTGCGGAACGCTGGTCGAGGCGGTCGTTCGGGACCACTTGGCGGATCTGGAGAGGAAGAGGTACGACCGGATTGCGAAGGTCCAGCGGACGACGGTCGAGGCCGTCCTCGAGGCCGCCAAGACGCTCGCCCGTCTTGAGCCCTGTCCGGGCCGCCCCTTCGACCACGCGACCCCGACGTACGTCGTCCCGGACGTCCACATCGTGAAGGAGGAAGACCGGTTGATCATCCTCCTGAACGAAGACGGCATCCCCGCGCTCCACATCTCCGGCTTCTACAAGGACCTGATGCGCCAGAAGGTGCTCCCTCCGGACGAGCGCGGATACCTGGAGGATCGCTACCGGTCGGCCCAGTGGTTCATCAAGTCGATCCAACAGCGGAACAGGACGATCTACCGGGTGACGGAGAGCATCCTCAAGTTCCAGCGGGACTTTTTCGACTACGGGATCCGCTACCTCAGGCCGCTCGTCCTTCGGGACGTGGCCGAGGACGTCGGGATGCACGAGTCGACGATCAGCCGGGTCACGGCCACCAAGTACATGAGCACCCCGCGGGGGCTCCTTGCCTTCAAGTTCTTCTTTTCGAGCGGGCTCGCGTCGTCATCAGGCGTCGATGTCTCGTCCGTTTCGGTCCGGGACATGATCCAGAAGATCATCCAGAAAGAGCCGACGGACCGCCCTTTGGCCGACCAGTCGATCGAAGAGATTCTGAGAAAACAGGGGATCGAGATCGCCCGGCGGACCGTGGCGAAGTACCGCGGGGAGCTAGGCATCCCCACCGCGGGCCGGCGAAGGGTCCGCGTGCCGGTTCCGAAGCAGTCGTCCCCGGAGGCGGGGGCTGAGAATTGA
PROTEIN sequence
Length: 520
VALEARLDLKLSQKLIMTPQLQLAIRLLRLSHLELTEAITQELTENPCLEETAIELEEGDAVAEKTEDAAEGESESSAEREAPGGEAGEDGAGSAAGVEGGRSDESDAPIIETRWDEYFEERASDGRDLGYMGPDRDEDLPSYDRTLANRETLTDHLLWQVRLTEASPSQREACEAVIGNLDENGYLDASVEDLVKLTGQNPEEIEAAIRVVQGFDPPGVGARTLAECLLLQLPALGLCGTLVEAVVRDHLADLERKRYDRIAKVQRTTVEAVLEAAKTLARLEPCPGRPFDHATPTYVVPDVHIVKEEDRLIILLNEDGIPALHISGFYKDLMRQKVLPPDERGYLEDRYRSAQWFIKSIQQRNRTIYRVTESILKFQRDFFDYGIRYLRPLVLRDVAEDVGMHESTISRVTATKYMSTPRGLLAFKFFFSSGLASSSGVDVSSVSVRDMIQKIIQKEPTDRPLADQSIEEILRKQGIEIARRTVAKYRGELGIPTAGRRRVRVPVPKQSSPEAGAEN*