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RBG_16_NSX_64_22_RBG_16_scaffold_2378_14

Organism: Nitrospirae bacterium RBG_16_64_22

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(12143..12844)

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase (EC:5.4.99.-); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=RBG_16_Nitrospirae_64_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 233.0
  • Bit_score: 468
  • Evalue 5.40e-129
pseudouridine synthase (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 43.8
  • Coverage: 240.0
  • Bit_score: 171
  • Evalue 2.70e-40
Pseudouridine synthase n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q092V5_STIAD similarity UNIREF
DB: UNIREF100
  • Identity: 43.8
  • Coverage: 240.0
  • Bit_score: 171
  • Evalue 9.70e-40

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Taxonomy

RBG_16_Nitrospirae_64_22_curated → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 702
ATGGCGTTCGACAAGCCGGCCGGTCTGCTCGTCCATCCGACGTTTCCGGACGGACGGCCGACGCTCATTGACCAGGCGCGTCTGGTCTGTTCGGACGCGACGCTCATGCATCGTCTTGACCGGGAGACGTCCGGCGTCGTTCTCGTTGCCAAGTCGCCAAAGGCGACGCGGTGGCTCGCCAAGGCTTTCCAGAAGAGAACGATCCAAAAGAATTATCTGGCCGTTGTCCACGGGGTCCCGCCGGAGCCGACGGGAACGATCGACGCCCCTTTGGGTCAGGCGGAGGGTTCGGAAGTCAGAATCCGGAGGGCGGTTGTTCGAACGGGGGGCGAGAGGGCCGTGACGGGTTTCCGCGTCCTCCAGAGCTTCGGCGGGTTTTCTCTTCTCGCCGTGAAGCCGTACACGGGCCGGCTTCACCAGATCCGCGTGCACCTTTCGTTTCTAGGCACCCCGGTCGTCGGCGACAAGATCTACGGGAGCGACGAGAGGGAATTCATCCGTTTTATCGAGACGGGGATGACGCCCGAGATGGAGGCGCGCCTTCTTCTTGCGCGGCACGCCCTTCACGCCGCCCGGGTCGAATTCCTCCACCACAACCTGCGGAGAGACGTCGAGATCGCCGCGCCGCTTCCGGAAGACATGCGGGAGTTCGTTCGATGCCGAGGTGGAAACCCCGAGGCCGCGGGATCGATGGAGGGGTAG
PROTEIN sequence
Length: 234
MAFDKPAGLLVHPTFPDGRPTLIDQARLVCSDATLMHRLDRETSGVVLVAKSPKATRWLAKAFQKRTIQKNYLAVVHGVPPEPTGTIDAPLGQAEGSEVRIRRAVVRTGGERAVTGFRVLQSFGGFSLLAVKPYTGRLHQIRVHLSFLGTPVVGDKIYGSDEREFIRFIETGMTPEMEARLLLARHALHAARVEFLHHNLRRDVEIAAPLPEDMREFVRCRGGNPEAAGSMEG*