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RBG_16_WS3_71_46_RBG_16_scaffold_7252_18

Organism: Candidatus Eisenbacteria bacterium RBG_16_71_46

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 11 / 38
Location: 19144..19422

Top 3 Functional Annotations

Value Algorithm Source
Cold shock DNA/RNA-binding protein n=2 Tax=Geobacter metallireducens RepID=Q39W72_GEOMG id=5225549 bin=16ft_combo_ws3_JS1 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 93.0
  • Bit_score: 186
  • Evalue 1.20e-44
cold-shock DNA-binding protein family protein; K03704 cold shock protein (beta-ribbon, CspA family) Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 92.0
  • Bit_score: 186
  • Evalue 1.60e-44
cold shock DNA/RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 78.8
  • Coverage: 66.0
  • Bit_score: 112
  • Evalue 7.80e-23

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Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 279
ATGGGGACCGGACGCGGCCGCGGCGCGACCACGCGGCAAGTGCGGGTCATAAGGACCCGGAGACAACAGGAGATTCAAGTGGCTCGTGGCACGGTGAAGTGGTTCAACGAGGCGAAGGGCTTTGGCTTCATTTCCCAGGCGGACGGCGAGGACGTGTTCGTCCACTTCTCGGCGATTCAGGGCGACGGCTTCAAGACGCTCGCCGAGGGTGAGACGCTCGAGTTCGACGTGACGCGCGGTCCGAAGGGGCTGCAGGCGGCGAACGTTCGCAAGGCCTAG
PROTEIN sequence
Length: 93
MGTGRGRGATTRQVRVIRTRRQQEIQVARGTVKWFNEAKGFGFISQADGEDVFVHFSAIQGDGFKTLAEGETLEFDVTRGPKGLQAANVRKA*