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RBG_16_WS3_71_46_RBG_16_scaffold_9520_10

Organism: Candidatus Eisenbacteria bacterium RBG_16_71_46

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 11 / 38
Location: comp(7735..8466)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J9T6_FRASU id=5225885 bin=16ft_combo_ws3_JS1 species=Frankia sp. genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 244.0
  • Bit_score: 475
  • Evalue 4.30e-131
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 243.0
  • Bit_score: 475
  • Evalue 6.00e-131
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 42.8
  • Coverage: 215.0
  • Bit_score: 159
  • Evalue 1.50e-36

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Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 732
ATGTCTGACAGGCTTCACGAATCTGACGAGGCGCTGCTCCTCGGGCTCCGGGTGGGAGACGAGGCGGCCTTCGCGACCCTCGTGGACAGCCTGAATGGACGGCTGCTGGCCCTGGCCCGCACATTCACCTCCTCGCCGGCGCTCGCCGAGGACATCGTCCAAGACACCTGGCTTGGCGTGATTCGAGGCCTGCGAGGCTTCGAGGGTCGCTCCACCCTTCGAACCTGGATCTTCAGCATCCTGGTACGGCGGGCCCGAACGATGGCGGCCCGTGAGGCGCGCCGGCTCTTCCCGAATTCCGAGCCGGCGGAGGCGATCGATGGGTCGAGCGGCGAATGGGTGCCCGGGGCGGGCAGGGTCGGCTTGTGGAACGACACCCCGGTGCCGTGGGGCCTCATGGATCCGGCGGCGGTGTTTCAATCGAAGGAGGCGCTCGAAGTGATCCGCAATGCCGTCGTTGCTCTCCCAGAGAGGCAGCGGCAGGCGCTTCTCCTGCGAGACGTCGAGGACATCAGTGCGAGGGACGTGTGTAACGTTCTCGAGATCAGCGAGACCTACCTAAGGGTACTGCTCCACCGAGGCCGAGCCCGCGTTCGCGAAGCGCTGGATCGATACCTGCGTGACGGTTCGGCACCACCGGTGAAGTCGCGAGCGCGCGCGACCCCGGACGCGAGCCGCCGCTCCGATTCATCCTCGAGCCTCCCGATCCGCGCGAATGGAGATGTGCAATGA
PROTEIN sequence
Length: 244
MSDRLHESDEALLLGLRVGDEAAFATLVDSLNGRLLALARTFTSSPALAEDIVQDTWLGVIRGLRGFEGRSTLRTWIFSILVRRARTMAAREARRLFPNSEPAEAIDGSSGEWVPGAGRVGLWNDTPVPWGLMDPAAVFQSKEALEVIRNAVVALPERQRQALLLRDVEDISARDVCNVLEISETYLRVLLHRGRARVREALDRYLRDGSAPPVKSRARATPDASRRSDSSSSLPIRANGDVQ*