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RIFCSPHIGHO2_01_FULL_Gammaproteobacteria_61_200_rifcsphigho2_01_scaffold_21283

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_Gammaproteobacteria_61_200_rifcsphigho2_01_scaffold_21283_1
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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1..750
-----------------
DNA (750bp)
protein (250aa)
Ammonia channel n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5E0F3_9GAMM
amtB; ammonia channel; K03320 ammonium transporter, Amt family Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
amtB; ammonia channel
RIFCSPHIGHO2_01_FULL_Gammaproteobacteria_61_200_rifcsphigho2_01_scaffold_21283_2
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1129..1452)
-----------------
DNA (324bp)
protein (108aa)
Uncharacterized protein n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GM33_THISH
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_Gammaproteobacteria_61_200_rifcsphigho2_01_scaffold_21283_3
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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1719..1925
-----------------
DNA (207bp)
protein (69aa)
Cold shock-like protein CspE n=1 Tax=Wohlfahrtiimonas chitiniclastica SH04 RepID=L8XYF0_9GAMM
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
cold-shock DNA-binding domain-containing protein
RIFCSPHIGHO2_01_FULL_Gammaproteobacteria_61_200_rifcsphigho2_01_scaffold_21283_4
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2164..3078)
-----------------
DNA (915bp)
protein (305aa)
MFS transporter n=1 Tax=Pseudomonas sp. S9 RepID=UPI0002557398
major facilitator superfamily permease Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
MFS transporter
RIFCSPHIGHO2_01_FULL_Gammaproteobacteria_61_200_rifcsphigho2_01_scaffold_21283_5
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3376..4452)
-----------------
DNA (1077bp)
protein (359aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Uncharacterized protein id=2162485 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
RIFCSPHIGHO2_01_FULL_Gammaproteobacteria_61_200_rifcsphigho2_01_scaffold_21283_6
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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4719..6014
-----------------
DNA (1296bp)
protein (432aa)
cfa; cyclopropane-fatty-acyl-phospholipid synthase (EC:2.1.1.79); K00574 cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
cfa; cyclopropane-fatty-acyl-phospholipid synthase (EC:2.1.1.79)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00037FFD95
RIFCSPHIGHO2_01_FULL_Gammaproteobacteria_61_200_rifcsphigho2_01_scaffold_21283_7
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6076..6447)
-----------------
DNA (372bp)
protein (124aa)
hypothetical protein n=1 Tax=gamma proteobacterium SCGC AB-629-P17 RepID=UPI0003768887
ymfK_[C]; putative phage repressor Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_Gammaproteobacteria_61_200_rifcsphigho2_01_scaffold_21283_8
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6625..7257)
-----------------
DNA (633bp)
protein (211aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00035CBEDA
TetR family transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
TetR family transcriptional regulator
RIFCSPHIGHO2_01_FULL_Gammaproteobacteria_61_200_rifcsphigho2_01_scaffold_21283_9
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7460..8317)
-----------------
DNA (858bp)
protein (286aa)
Putative uncharacterized protein n=2 Tax=Nitrosococcus oceani RepID=Q3J7B6_NITOC
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_Gammaproteobacteria_61_200_rifcsphigho2_01_scaffold_21283_10
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8314..9222)
-----------------
DNA (909bp)
protein (303aa)
Tyrosine recombinase XerC n=1 Tax=endosymbiont of Tevnia jerichonana (vent Tica) RepID=G2FH63_9GAMM
tyrosine recombinase XerC; K03733 integrase/recombinase XerC Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
site-specific DNA tyrosine recombinase XerC
RIFCSPHIGHO2_01_FULL_Gammaproteobacteria_61_200_rifcsphigho2_01_scaffold_21283_11
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9241..9942)
-----------------
DNA (702bp)
protein (234aa)
phytochrome sensor protein n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI0003605778
phytochrome sensor protein; K09921 hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
phytochrome sensor protein
RIFCSPHIGHO2_01_FULL_Gammaproteobacteria_61_200_rifcsphigho2_01_scaffold_21283_12
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9939..10445)
-----------------
DNA (507bp)
protein (169aa)
diaminopimelate epimerase (EC:5.1.1.7); K01778 diaminopimelate epimerase [EC:5.1.1.7] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
dapF; diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Nitrosomonas eutropha (strain C91) RepID=DAPF_NITEC
Displaying 12 items

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