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RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_15753_17

Organism: Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_01_FULL_43_100

near complete RP 37 / 55 BSCG 42 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(7749..8015)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L23 n=1 Tax=Pelagibacter ubique RepID=UPI0003B42D2F similarity UNIREF
DB: UNIREF100
  • Identity: 52.3
  • Coverage: 88.0
  • Bit_score: 89
  • Evalue 1.40e-15
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 88.0
  • Bit_score: 172
  • Evalue 2.30e-40
rplW; 50S ribosomal protein L23 similarity KEGG
DB: KEGG
  • Identity: 50.6
  • Coverage: 81.0
  • Bit_score: 83
  • Evalue 2.80e-14

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Taxonomy

RLO_OD1_Giovannonibacteria_43_11c → Giovannonibacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 267
ATGTCCAAATTGATTAATCCTATAGTTAGCGAAAAGGCCAATATTTTGTCTTCGGGCGGAGTATATTCTTTTCGTGTTGAAAAAGATGCCAATAAATTTGATATTAAAAAGTCAGTTGAAGAGCTTTTTAAAGTTAATGTGCGAAGAGTTAATTTGATAACGATACCTCCAAAAAAAAGAATCATGCGCGGAAAAGCGGGCTTCAAATCCGGATACAAAAAAGCCATCGTTTATTTAAAAAAGGGGCAAAAGATTGACTTAGCATGA
PROTEIN sequence
Length: 89
MSKLINPIVSEKANILSSGGVYSFRVEKDANKFDIKKSVEELFKVNVRRVNLITIPPKKRIMRGKAGFKSGYKKAIVYLKKGQKIDLA*