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RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_14697_2

Organism: Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_01_FULL_43_100

near complete RP 37 / 55 BSCG 42 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 1436..1723

Top 3 Functional Annotations

Value Algorithm Source
hbs; non-specific DNA-binding protein HBsu; K03530 DNA-binding protein HU-beta Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 95.0
  • Bit_score: 190
  • Evalue 1.50e-45
nucleoid DNA-binding protein HU-beta; K03530 DNA-binding protein HU-beta id=5803144 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 55.2
  • Coverage: 96.0
  • Bit_score: 103
  • Evalue 1.30e-19
DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 51.1
  • Coverage: 94.0
  • Bit_score: 97
  • Evalue 1.60e-18

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Taxonomy

RLO_OD1_Giovannonibacteria_43_11c → Giovannonibacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 288
ATGAATAAAGCAGAATTATCGCAAAAATTGTGGGAGCTTCATTCCAAAAAAGGGATGGATGTATCTAAAAAACACGCGGAAGAGGTCGTAGACTTTGTTTTTGACACGATTGCCGACACAATGAAGCGCGGGGACGAAGTCTCCATCGCCGGATTCGGCACTTTTGTCGCCAAACAAAGGAAGGCAAGGCAGGCCAGAAACCCGAAAACTGGAGCGGCTGTGAGCGTTCCGGCTATGAAAGTCCCGAAATTCAAAGCAGGCAAGGGCCTCAAAGATGCAGTGAAGTAG
PROTEIN sequence
Length: 96
MNKAELSQKLWELHSKKGMDVSKKHAEEVVDFVFDTIADTMKRGDEVSIAGFGTFVAKQRKARQARNPKTGAAVSVPAMKVPKFKAGKGLKDAVK*