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RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_14697_12

Organism: Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_01_FULL_43_100

near complete RP 37 / 55 BSCG 42 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(6726..7226)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigW; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 166.0
  • Bit_score: 329
  • Evalue 2.80e-87
RNA polymerase sigma factor, sigma-70 family id=15190917 bin=GWC1_OP11_49_16_COMPLETE species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) similarity UNIREF
DB: UNIREF100
  • Identity: 44.0
  • Coverage: 166.0
  • Bit_score: 158
  • Evalue 4.70e-36
RNA polymerase sigma70 factor similarity KEGG
DB: KEGG
  • Identity: 28.5
  • Coverage: 172.0
  • Bit_score: 74
  • Evalue 2.50e-11

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Taxonomy

RLO_OD1_Giovannonibacteria_43_11c → Giovannonibacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 501
ATGAAAGAAGAGGAATTTTCGGCGGCATACGAATCTTTTTCCGATGCTCTCTTTAGGCATTGTTATTTCAGGCTGTATGATCGCGAAAAATCTAAAGATATCGTTCAAGAGGCGTTTATTAAAACTTGGCAGTATGCATCAAAAGGAGTAGAGATCGAAAATACGAGGGCATTCCTCTATAAAGTTCTGAATAATCTTATTATCGATGAAATAAGAAAGAAGAAGGCACTGTCACTGGAAATTCTTCTTGAAGAAGGCTTTCAGCCGATTGACAATAAAGAAGGCAGAAGAAGTTTGGAAAATTTTTCCGACTTTAAGGATCTTCTAAAAATAATTCATAAACTGGAGGAAAATAAAAAAAATCTTCTCATTATGAGATATATTGACGAGCTAGGGCCAAAAGAAATTGCGCATATTCTTGGGGAAAACGAAAATATAATATCGGTGCGTTTAAACAGGGCTATAAAAGAAGTAAGAGAAATATTTAACAATGGAAGATAG
PROTEIN sequence
Length: 167
MKEEEFSAAYESFSDALFRHCYFRLYDREKSKDIVQEAFIKTWQYASKGVEIENTRAFLYKVLNNLIIDEIRKKKALSLEILLEEGFQPIDNKEGRRSLENFSDFKDLLKIIHKLEENKKNLLIMRYIDELGPKEIAHILGENENIISVRLNRAIKEVREIFNNGR*