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RIFCSPHIGHO2_01_FULL_OD1_43_140_rifcsphigho2_01_scaffold_4166_33

Organism: Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_01_FULL_43_140

near complete RP 42 / 55 MC: 1 BSCG 43 / 51 ASCG 9 / 38
Location: comp(29354..29578)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S20 {ECO:0000313|EMBL:KKT63001.1}; TaxID=1618648 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_44_26.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 74.0
  • Bit_score: 142
  • Evalue 2.80e-31
30S ribosomal protein S20 id=2803127 bin=GWB1_KAZAN_52_7 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWB1_KAZAN_52_7 organism_group=Kazan similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 74.0
  • Bit_score: 76
  • Evalue 1.00e-11
SSU ribosomal protein S20P similarity KEGG
DB: KEGG
  • Identity: 43.9
  • Coverage: 82.0
  • Bit_score: 63
  • Evalue 2.60e-08

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Taxonomy

Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_44_26 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 225
ATGCCAATAATTAAATCTGCTAAAAAAGCCCTGCGACAGTCAGCCAAAAGGCGCGTCAAAAACCAGACTTGGAAAAATAAACTGAATGAAGCCGTAAAGAAAGCGGTTTTGGAAAAATCAGCGCCCGCGTTGTCACAAGCCTATAAAATTATAGACAAGTCAGCCAAAAGAGGCCTCATCAAAAAAAACAAAGCCTCGAGAATGAAATCCCGCCTGGCCCGCTAG
PROTEIN sequence
Length: 75
MPIIKSAKKALRQSAKRRVKNQTWKNKLNEAVKKAVLEKSAPALSQAYKIIDKSAKRGLIKKNKASRMKSRLAR*