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RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_633

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Displaying items 31-60 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_633_31
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(25218..25808)
DNA (591bp) protein (197aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
Putative uncharacterized protein id=4891826 bin=GWC2_Deltaproteobacteria_56_8 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_633_32
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(25844..26329)
DNA (486bp) protein (162aa)
transmembrane_regions 5..24 Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
transmembrane_regions 5..24 id=92048 bin=ACD61 species=ACD61 genus=ACD61 taxon_order=ACD61 taxon_class=ACD61 phylum=OP11 tax=ACD61 organism_group=OP11 (Microgenomates) organism_desc=OP11
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_633_33
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(26386..26637)
DNA (252bp) protein (84aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_633_34
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(26759..30634)
DNA (3876bp) protein (1292aa)
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
deg:DehalGT_0541 DNA-directed RNA polymerase, beta' subunit; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] id=57185 bin=ACD43 species=ACD43 genus=ACD43 taxon_order=ACD43 taxon_class=ACD43 phylum=OD1 tax=ACD43 organism_group=OD1 (Parcubacteria) organism_desc=OD1
DNA-directed RNA polymerase subunit beta'
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_633_35
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(30639..33938)
DNA (3300bp) protein (1100aa)
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=uncultured bacterium RepID=K2C0M7_9BACT
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_633_36
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(34057..34413)
DNA (357bp) protein (119aa)
Universal bacterial protein YeaZ Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
Universal bacterial protein YeaZ id=2169521 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_633_37
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(34415..34987)
DNA (573bp) protein (191aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
Putative uncharacterized protein id=4731754 bin=GWC2_OD1_43_27 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_633_38
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(35052..35987)
DNA (936bp) protein (312aa)
putative methicillin resistance protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
hypothetical protein id=96000 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
methicillin resistance protein
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_633_39
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(35990..36556)
DNA (567bp) protein (189aa)
Holliday junction DNA helicase subunit RuvA Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
ruvA; Holliday junction DNA helicase RuvA; K03550 holliday junction DNA helicase RuvA id=16715 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
Holliday junction DNA helicase subunit RuvA
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_633_40
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

36660..38660
DNA (2001bp) protein (667aa)
excinuclease ABC subunit B; K03702 excinuclease ABC subunit B Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
UvrABC system protein B id=3239298 bin=GWB1_KAZAN_52_7 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWB1_KAZAN_52_7 organism_group=Kazan
excinuclease ABC subunit B
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_633_41
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

38765..41569
DNA (2805bp) protein (935aa)
est; esterase (EC:3.1.1.1) Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
est; esterase (EC:3.1.1.1)
Putative regulator of chromosome condensation RCC1 id=5227540 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_633_42
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

41581..41850
DNA (270bp) protein (90aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_633_43
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists


41956..42219
DNA (264bp) protein (88aa)
30S ribosomal protein S20; K02968 small subunit ribosomal protein S20 Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
30S ribosomal protein S20; K02968 small subunit ribosomal protein S20 id=15189999 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
30S ribosomal protein S20
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_633_44
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(42304..42951)
DNA (648bp) protein (216aa)
Phosphoserine phosphatase Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
Phosphoserine phosphatase id=1279273 bin=GWE1_Burkholderiales_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_633_45
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(42938..43414)
DNA (477bp) protein (159aa)
NUDIX hydrolase n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DHM4_9EURY id=91639 bin=ACD61 species=Candidatus Micrarchaeum acidiphilum genus=Candidatus Micrarchaeum taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=ACD61 organism_group=OP11 (Microgenomates) organism_desc=OP11
NUDT1; nudix (nucleoside diphosphate linked moiety X)-type motif 1 Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
NUDIX hydrolase
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_633_46
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(43411..45729)
DNA (2319bp) protein (773aa)
DNA polymerase i; K02335 DNA polymerase I [EC:2.7.7.7] Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
polA; DNA polymerase I (EC:2.7.7.7); K02335 DNA polymerase I [EC:2.7.7.7] id=5803218 bin=OD1_GWC2_34_28 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
DNA polymerase i
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_633_47
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(45795..46769)
DNA (975bp) protein (325aa)
Akr1a1, 2610201A18Rik, Akr1a4; aldo-keto reductase family 1, member A1 (aldehyde reductase) (EC:1.1.1.2); K00002 alcohol dehydrogenase (NADP+) [EC:1.1.1.2] Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curate
hypothetical protein id=5101832 bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
akr1a1; aldo/keto reductase
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_633_48
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(46845..47153)
DNA (309bp) protein (103aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_633_49
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(47212..47349)
DNA (138bp) protein (46aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_633_50
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(47376..47669)
DNA (294bp) protein (98aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
Putative uncharacterized protein id=3971580 bin=GWF2_Lentisphaerae_50_93 species=Halobacteroides halobius genus=Halobacteroides taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_633_51
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(47775..49415)
DNA (1641bp) protein (547aa)
type IV pilus assembly protein PilB; K02652 type IV pilus assembly protein PilB Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
Tfp pilus assembly protein PilB; K02652 type IV pilus assembly protein PilB id=3133 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_633_52
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(49443..50591)
DNA (1149bp) protein (383aa)
phosphoesterase RecJ domain-containing protein; K06881 phosphoesterase RecJ domain-containing protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
MgpA protein id=1816992 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
phosphoesterase RecJ domain-containing protein
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_633_53
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

50657..51076
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CX99_9BACT
hypothetical protein; K06925 UPF0079 ATP-binding protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_633_54
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

51051..52199
DNA (1149bp) protein (383aa)
von Willebrand factor A Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
VanW family protein id=2923515 bin=GWC1_KAZAN_52_13 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWC1_KAZAN_52_13 organism_group=Kazan
von Willebrand factor A
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_633_55
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

52202..53443
DNA (1242bp) protein (414aa)
M29 family peptidase; K01269 aminopeptidase [EC:3.4.11.-] Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
Thermophilic metalloprotease (M29) superfamily n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JFU9_9BACT
Thermophilic metalloprotease (M29) superfamily
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_633_56
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

53479..54516
DNA (1038bp) protein (346aa)
Holliday junction DNA helicase RuvB; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12] Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Johnsonella ignava ATCC 51276 RepID=G5GGA4_9FIRM
Holliday junction DNA helicase RuvB
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_633_57
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

54524..54751
DNA (228bp) protein (76aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_633_58
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

54758..55327
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Z261_9BACT
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_633_59
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(55353..56417)
DNA (1065bp) protein (355aa)
recF; recombination protein F, RecF Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
DNA replication and repair protein RecF id=3006328 bin=GWC1_CPR2_39_9 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
recombinase RecF
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_633_60
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(56418..57518)
DNA (1101bp) protein (367aa)
dnaN; DNA polymerase III beta subunit (EC:2.7.7.7) Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
dnaN; DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=uncultured bacterium RepID=K1ZIZ8_9BACT
Displaying items 31-60 of 67 in total

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