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RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_1468

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_1468_1
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..207
DNA (207bp) protein (69aa)
id=4445028 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
id=4445028 Tax=RBG_16_Gamma2_65_34_curated
RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_1468_2
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

comp(265..1482)
DNA (1218bp) protein (406aa)
Putative uncharacterized protein id=4445029 bin=GWC2_Nitrospirae-rel_56_14 species=Pelodictyon luteolum genus=Pelodictyon taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
hypothetical protein
RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_1468_3
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1841..2506
DNA (666bp) protein (222aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Putative uncharacterized protein id=1777807 bin=GWD2_Deltaproteobacteria_55_8 species=Tribolium castaneum genus=Tribolium taxon_order=Coleoptera taxon_class=Insecta phylum=Arthropoda tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_1468_4
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2674..3009)
DNA (336bp) protein (112aa)
cytochrome c, class I Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Cytochrome c4 id=4445031 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
cytochrome c, class I
RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_1468_5
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3101..3397)
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI00037A0B75
class I cytochrome c Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
class I cytochrome c
RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_1468_6
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3597..3929)
DNA (333bp) protein (111aa)
Cytochrome c family protein n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JXI1_9GAMM
putative cytochrome c, class I Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
cytochrome C
RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_1468_7
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4025..4459)
DNA (435bp) protein (145aa)
Cytochrome c family protein n=1 Tax=uncultured gamma proteobacterium RepID=H5SIZ4_9GAMM
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_1468_8
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4863..5639)
DNA (777bp) protein (259aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein id=12497476 bin=THIO_MID species=unknown genus=unknown taxon_order=unknown taxon_class=Zetaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_1468_9
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5685..6926)
DNA (1242bp) protein (414aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI0003699B1E
cytochrome c family protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
cytochrome c family protein
RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_1468_10
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7010..8194)
DNA (1185bp) protein (395aa)
polysulfide reductase NrfD Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
polysulfide reductase NrfD id=14424382 bin=bin1_lowGC species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=bin1_lowGC organism_group=Unknown_CP
polysulfide reductase NrfD
RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_1468_11
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8194..9024)
DNA (831bp) protein (277aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RYM6_FERPA
4Fe-4S ferredoxin iron-sulfur binding domain protein; K08358 tetrathionate reductase subunit B Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
4Fe-4S ferredoxin iron-sulfur binding domain protein
RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_1468_12
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9077..10126)
DNA (1050bp) protein (350aa)
Cytochrome c family protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q48A64_COLP3
cytochrome c family protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
cytochrome c family protein
RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_1468_13
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10221..10550
DNA (330bp) protein (110aa)
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_1468_14
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10460..11020)
DNA (561bp) protein (187aa)
Cytochrome c-554 n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GIU4_NITSI
cytochrome c-554 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
cytochrome c-554
RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_1468_15
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11228..12160)
DNA (933bp) protein (311aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein id=2268390 bin=GWB2_Nitrospirae_rel_47_37 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein
RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_1468_16
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12202..12552)
DNA (351bp) protein (117aa)
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_1468_17
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12555..12992)
DNA (438bp) protein (146aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein id=2268388 bin=GWB2_Nitrospirae_rel_47_37 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_1468_18
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13000..14334)
DNA (1335bp) protein (445aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein id=1714442 bin=GWB2_Desulfobacterales_56_26 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_1468_19
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14387..14947)
DNA (561bp) protein (187aa)
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_1468_20
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14929..15621)
DNA (693bp) protein (231aa)
uncharacterized component of anaerobic dehydrogenase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
cytoplasmic chaperone TorD family protein id=2268386 bin=GWB2_Nitrospirae_rel_47_37 species=Endoriftia persephone genus=Endoriftia taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
anaerobic dehydrogenase
RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_1468_21
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15608..16786)
DNA (1179bp) protein (393aa)
4Fe-4S ferredoxin Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
4Fe-4S dicluster domain protein id=1835221 bin=GWB2_Geobacter-like_52_12 species=Selenomonas sp. CM52 genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
4Fe-4S ferredoxin
RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_1468_22
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16811..17437)
DNA (627bp) protein (209aa)
Fe-S-cluster-containing hydrogenase components 1 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Dimethylsulfoxide reductase, chain B id=4949681 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_1468_23
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17448..20372)
DNA (2925bp) protein (975aa)
molybdopterin oxidoreductase; K08357 tetrathionate reductase subunit A Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Anaerobic dehydrogenase, typically selenocysteine-containing id=2586404 bin=GWC2_Methylomirabilis_70_16 species=Desulfosporosinus youngiae genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
molybdopterin oxidoreductase
RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_1468_24
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20593..22752)
DNA (2160bp) protein (720aa)
copper-translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Copper/silver-translocating P-type ATPase id=4445033 bin=GWC2_Nitrospirae-rel_56_14 species=Methylomicrobium album genus=Methylomicrobium taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
copper-translocating P-type ATPase
RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_1468_25
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22910..23428
DNA (519bp) protein (173aa)
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_1468_26
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23472..23906
DNA (435bp) protein (145aa)
cyclase n=1 Tax=Thioalkalivibrio sp. AKL11 RepID=UPI000361F19D
cyclase/dehydrase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
cyclase/dehydrase
RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_1468_27
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23942..24343)
DNA (402bp) protein (134aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Putative uncharacterized protein id=3897367 bin=GWC2_Nitrospirae-rel_56_14 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein
RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_1468_28
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24450..24665)
DNA (216bp) protein (72aa)
Methyltransferase type 11 n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8KBZ5_NITWC
methyltransferase type 11 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
methyltransferase type 11
Displaying 28 items

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