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RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_24404_2

Organism: Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_45_21

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: 2288..2488

Top 3 Functional Annotations

Value Algorithm Source
cspC_[H]; cold-shock DNA-binding domain protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 66.0
  • Bit_score: 138
  • Evalue 3.60e-30
Cold-shock DNA-binding domain protein id=2057374 bin=GWB2_CP_45_9 species=Thioalkalivibrio nitratireducens genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3 similarity UNIREF
DB: UNIREF100
  • Identity: 88.1
  • Coverage: 67.0
  • Bit_score: 128
  • Evalue 3.50e-27
cspC_[H]; cold-shock DNA-binding domain protein similarity KEGG
DB: KEGG
  • Identity: 71.9
  • Coverage: 64.0
  • Bit_score: 99
  • Evalue 3.70e-19

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Taxonomy

R_WOR_2_45_21 → WOR-2 → Bacteria

Sequences

DNA sequence
Length: 201
ATGGTAAAAGGATCAGTAAAGTGGTTCAGTGATCAAAAAGGTTACGGATTTATCACGCCTGAAAATGGTAAGGATGTATTTGTGCATCATTCCGCTATTCAGGGCGAAGGATATAAGTCTTTAGCCGAAGGCCAGCAAGTCGAATTTGAAATCGAACAAGGCCCCAAAGGTGAACAGGCGGTTAAAGTCGTCAAGTTATAA
PROTEIN sequence
Length: 67
MVKGSVKWFSDQKGYGFITPENGKDVFVHHSAIQGEGYKSLAEGQQVEFEIEQGPKGEQAVKVVKL*