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scnpilot_p_inoc_scaffold_1393_8

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(7297..8376)

Top 3 Functional Annotations

Value Algorithm Source
OmpC family outer membrane porin n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKI0_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 80.4
  • Coverage: 357.0
  • Bit_score: 570
  • Evalue 1.10e-159
  • rbh
OmpC family outer membrane porin {ECO:0000313|EMBL:EIK89720.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogeno similarity UNIPROT
DB: UniProtKB
  • Identity: 80.4
  • Coverage: 357.0
  • Bit_score: 570
  • Evalue 1.60e-159
gram-negative porin family protein similarity KEGG
DB: KEGG
  • Identity: 43.9
  • Coverage: 355.0
  • Bit_score: 279
  • Evalue 1.90e-72

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1080
ATGAAGAAGATCAGCCTGATCGGCGCCGGCCTGCTGGCGCCCGTCCTGGCCCTGGCGCAAGGCGGCGCCCCGGCGGCCTCGTCCGTGCAGCTGTACGGGCGCCTGGACGCGTCCATCAACTCGGTGCGCTACTCGGCCACCGGCGCGGCGCCCTCGCGCCAGAACAGCTTCCTGTCGAGCGACACCTCGCGCTGGGGCATTCGCGGCAACGAAGACCTGGGCGGCGGCCTGCAGGCCTTCTTCAAGCTGGAGAGCGGCTTCAACGTCGACACCGGCGCGCCATCCAACCCGGCCGCGTACTTCAACCGCGAGACCCTGCTGGGCCTGCGCGACCAGCGCTACGGCACGCTGATCCTGGGCAGCCAGTTCACGCCCAACATCGCCATGTCGCTGCGCGTGGACCCGTTCCAGCGCTCTGGCATGGGCGCCAGCCTCACGCTGTTCCAGCGCGGCGGCGCGGCCGGCCTGCTGGGCTACCCGGCGATGCACAACAACGCGGTGCAGTACATCTCGCCCAGCTTCGGCGGTGTCGTCGGCAAGCTGATGGTGGCCAGCAACGAAGGCGCCTCGCCCTTCGGCAACCCGTCCAGCCTGGCGCTGGAGTACAGCAGCAAGACGCTCTACCTCGGTCTCGTCCACGACCGCCTGAACGCCACCGGCGCCGCCGCCGGCCAACCCGCGCTCGCCTCGGTGAAGAACCAGGTGACCAGCCTGGGCGTGAGCTATGACCTGAAGGCGGTGAAGCTGTACGGCTACCTGCTCAAGGCCGACGTGGACGGCGCGCCCGGCATGCGCGGCGGCTTCGTGGGCGTCAAGGTGCCCGCGGGCGTCGGCGAGATCAACGCCGTCTACCAGGTGCGCAACGTGGACGATGCGGCCAACTCCGACGCGCGCCTGTTCGCGGTGCAGTACATGCACCCGCTGTCCAAACGCACCTCGGTCTACACCAGCGTGGGCCACCAGAGCAACAAGGGCAACGCGGCCTTCGGCCTGTGGCCCTCGCGCACGGAAGCCGGCGGCGGCCCCGCCGCCGGTGCCGACGTGCGCGGCTTCCAGGTGGGCATGCGCCACGTCTTCTGA
PROTEIN sequence
Length: 360
MKKISLIGAGLLAPVLALAQGGAPAASSVQLYGRLDASINSVRYSATGAAPSRQNSFLSSDTSRWGIRGNEDLGGGLQAFFKLESGFNVDTGAPSNPAAYFNRETLLGLRDQRYGTLILGSQFTPNIAMSLRVDPFQRSGMGASLTLFQRGGAAGLLGYPAMHNNAVQYISPSFGGVVGKLMVASNEGASPFGNPSSLALEYSSKTLYLGLVHDRLNATGAAAGQPALASVKNQVTSLGVSYDLKAVKLYGYLLKADVDGAPGMRGGFVGVKVPAGVGEINAVYQVRNVDDAANSDARLFAVQYMHPLSKRTSVYTSVGHQSNKGNAAFGLWPSRTEAGGGPAAGADVRGFQVGMRHVF*