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scnpilot_p_inoc_scaffold_2199_12

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(14931..15548)

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0 similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 179.0
  • Bit_score: 360
  • Evalue 1.40e-96
Peptide deformylase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSJ7_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 179.0
  • Bit_score: 360
  • Evalue 1.00e-96
  • rbh
def; peptide deformylase similarity KEGG
DB: KEGG
  • Identity: 78.0
  • Coverage: 191.0
  • Bit_score: 301
  • Evalue 1.50e-79

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 618
ATGCGCCGAGGCATTGCCCATTTCCACCCCTCCAACGGGCCCCGCGCCCAATGGCCCCGTTGCTTGTTCGTCATTGCCATGACCATTCATGCCATCCTGAAAATGGGCGATCCGCGCCTGCTGCGCCACGCCCAGCCCGTCACCGCCTTCGACACGCCCGAGCTGCACCGGCTGGTGGCCGACCTCAAGGACACCATGGCCGACGCCAACGGCGCGGGCCTGGCGGCGCCGCAGATCGGCGTGGACCTGCAGGTTGTCATCTTTGGCAGCGGCGCGCCCAACCCGCGCTACCCGGACGCGCCGGTGGTTCCGCGCACCACGCTGATCAATCCGGTCATCACGCCTTTGGGCGACGAAGAGGAAGAGGGCTGGGAAGGTTGCCTGTCGGTGCCCGGGCTGCGCGGCGTGGTGCCGCGCTGGCGGCGCATCCGCTACCAGGGCTTCGACGAATTCGGGCAGGCGATCGTGCGCGAGGCCGAGGGCTTTCATGCGCGCGTGGTGCAGCACGAGTGCGACCACCTCTGGGGCACGCTGTACCCCATGCGGGTGCGCGACTTCCGCCGCTTCGGCTTCACCGAGGTGCTGTTCCCGGGGCTGGACGCCAGTGACGACGACTGA
PROTEIN sequence
Length: 206
MRRGIAHFHPSNGPRAQWPRCLFVIAMTIHAILKMGDPRLLRHAQPVTAFDTPELHRLVADLKDTMADANGAGLAAPQIGVDLQVVIFGSGAPNPRYPDAPVVPRTTLINPVITPLGDEEEEGWEGCLSVPGLRGVVPRWRRIRYQGFDEFGQAIVREAEGFHARVVQHECDHLWGTLYPMRVRDFRRFGFTEVLFPGLDASDDD*