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scnpilot_p_inoc_scaffold_2368_23

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(18237..18758)

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0 similarity UNIPROT
DB: UniProtKB
  • Identity: 93.6
  • Coverage: 172.0
  • Bit_score: 324
  • Evalue 9.30e-86
Peptide deformylase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MT48_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 93.6
  • Coverage: 172.0
  • Bit_score: 324
  • Evalue 6.70e-86
  • rbh
peptide deformylase similarity KEGG
DB: KEGG
  • Identity: 80.8
  • Coverage: 167.0
  • Bit_score: 272
  • Evalue 6.50e-71

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 522
ATGAGCGCCCCCGACACCCTGCCCATCCTGCGCTACCCCGACCCGCGCCTGCACACCGTCGCCCAGCCCGTCGCGGCGGTGGACGAGCGCATCCGCGCGCTCATTCCCCGCATGCTCGCCACCATGTACGAGGCCAACGGCATCGGCCTGGCCGCGACGCAGGTCGACATCCACGAGCGGCTCATCGTCATCGACGTGAGCGAATCGCGCGACCAGCCGCTGGTGCTCATCAACCCGGTGATCGAATGGGCCAGCCCCGAGACGCGCAAGGGCGAAGAGGGCTGCCTGTCGGTGCCCGGCATCTACGACGGCGTGGAGCGCTCCACGGCCGTGCGCGTGCGCGCGCTCGACGGCGAAGGCGCGCAGCGTACGATCGAGGCCGAAGGCCTGCTCGCGGTCTGCATCCAGCATGAAATGGACCATCTCGTGGGCAAGGTTTTTGTCGAGTACCTGTCGCCGCTCAAGCGCAACAGGATCAAATCCAAGCTTGTGAAAGCCCAGCGCGAAGCCCTGCGCGAGTGA
PROTEIN sequence
Length: 174
MSAPDTLPILRYPDPRLHTVAQPVAAVDERIRALIPRMLATMYEANGIGLAATQVDIHERLIVIDVSESRDQPLVLINPVIEWASPETRKGEEGCLSVPGIYDGVERSTAVRVRALDGEGAQRTIEAEGLLAVCIQHEMDHLVGKVFVEYLSPLKRNRIKSKLVKAQREALRE*