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scnpilot_p_inoc_scaffold_2736_18

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(8609..8977)

Top 3 Functional Annotations

Value Algorithm Source
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 id=5080777 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 123.0
  • Bit_score: 235
  • Evalue 2.90e-59
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydroge similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 122.0
  • Bit_score: 235
  • Evalue 4.00e-59
ribosomal protein L14 similarity KEGG
DB: KEGG
  • Identity: 97.5
  • Coverage: 122.0
  • Bit_score: 232
  • Evalue 8.90e-59

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 369
ATGATTCAAACGCAATCTCGACTCGATGTTGCTGACAACACGGGTGCGAAATCCGTGATGTGCATCAAGGTGCTCGGCGGCTCCAAGCGCCGCTACGCCAGCGTGGGCGATGTCATCAAGGTCAGCATCAAGGAAGCAGCGCCTCGCGGCCGCGTCAAAAAGGGCGAGGTCTACAACGCCGTGGTGGTGCGCACCGCCAAGGGCATTCGCCGCCAGGACGGCGCACTGATCAAGTTCGATGGCAACGCGGCTGTGTTGCTCAACGCCAAGCTGGAGCCCATCGGCACCCGCATCTTCGGCCCGGTGACGCGCGAGTTGCGCACCGAGAAGTTCATGAAGATCGTGTCGCTGGCCCCTGAGGTCCTCTGA
PROTEIN sequence
Length: 123
MIQTQSRLDVADNTGAKSVMCIKVLGGSKRRYASVGDVIKVSIKEAAPRGRVKKGEVYNAVVVRTAKGIRRQDGALIKFDGNAAVLLNAKLEPIGTRIFGPVTRELRTEKFMKIVSLAPEVL*