ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

RIFCSPHIGHO2_02_FULL_CP_39_82_rifcsphigho2_02_scaffold_3354_13

Organism: Nitrospinae bacterium RIFCSPHIGHO2_02_FULL_39_82

near complete RP 48 / 55 BSCG 49 / 51 ASCG 11 / 38
Location: comp(10752..12095)

Top 3 Functional Annotations

Value Algorithm Source
UDP-N-acetylmuramoylalanine--D-glutamate ligase; K01925 UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 447.0
  • Bit_score: 868
  • Evalue 3.40e-249
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CXA4_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 47.3
  • Coverage: 450.0
  • Bit_score: 410
  • Evalue 1.80e-111
UDP-N-acetylmuramoylalanine--D-glutamate ligase similarity KEGG
DB: KEGG
  • Identity: 44.3
  • Coverage: 449.0
  • Bit_score: 402
  • Evalue 1.80e-109

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Nitrospinae_39_15 → Nitrospinae → Bacteria

Sequences

DNA sequence
Length: 1344
ATGGAAATCAGAAATAAAAATGTTCTGGTAGTTGGTCTTGCAAGGTCAGGTGTCTCTGCTGCTAATCTGCTGTGTAAATTAGGGGCAAAGGTAACTATAACCGATGAGAAAAGAGAAAGTGAATTATCTGAAAATATCAGAAAACTTACTAAAGGGATTTACCTTAAGTTGGGAGGTCATAATGGGGTAGATATAGCAAATGTTGATTTAGTGGTAATAAGCCCGGGTGTGCCATGGGACTCCCCGTTTTTAAACAGAATAAGAGAAAATGGTATAAGGATCATAAGTGAAGTGGAACTTGCATTTAAGTATATCAAAGCACCACTTATTGCCGTAACAGGAACAAATGGAAAGACCACAACAACCACCCTCATAGGGGAAATGCTTAAAAAAGATGACAGGAATGTTTTTGTAGGCGGGAATATCGGTAATCCAATGTGTGAAGAGGTTCTGAATGGAAGTAGCAGTGAACTTATCTTATCAGAGATAAGCACATTTCAAATGGAAGGGATAGAGACCTTTAAGCCACACATAAGCGTAATATTAAATATCACCCCTGACCACATGGACAGACATAAGAGTATGACCGAGTATATAGCATTAAAAAAGAGAGTTTTTATAAACCAGAATACAAGAGATTATACAGTTTTTAATATGGACGATAAAATTACTGCTGCATTATCCAATGAGGGAAAAGGGGAAAGGATATTTTTCAGCCGCATTAGAGAGGTGGATAACGGGGCATTTGTAAGAGGAAACAATATAATTTTTAGAAGGAATAGAAAAGAGGAGATAGTTAGTACCCTGAAGGATTTAAAAATTATAGGTGTCCATAATATAGAAAATACACTGGCATCTGTGGCTGTGGGTGGAATTTGTGATATACCTCCACGGTTAATGAGAGAGGTAATATCGGAGTTCAGCGGGATACCACACAGAATGGAATTTGTGAGGGAAATAGAAGGTATCAAATTTATAAATGATTCAAAAGGGACAAATGTGGGTGCCACGATTAAATCCATTGAGAGTTTTAATGAACCCATTATATTAATAGCAGGCGGGAAAGATAAGGGGAGCGATTATTTGCCCTTAAAGCCTCTGATTGAAGATAGGGTAAAATTTTTAATACTGATAGGTGAAGCAAAGAAAAAGATGGCATCAGTTATGAATGGATTCAGAAATATATTAAATGCGGAGAGTTTTGAGGAGGCTGTAAATGAGGCATTTGATAAGGCTGAAAAGGGAGACGTAGTGCTACTCTCTCCTGCCTGTGCCAGTTTTGATATGTTCAGAGACTATGAAGACAGGGGAGAGCAGTTTAGGAAAATAGTAGAAAGTCTATAA
PROTEIN sequence
Length: 448
MEIRNKNVLVVGLARSGVSAANLLCKLGAKVTITDEKRESELSENIRKLTKGIYLKLGGHNGVDIANVDLVVISPGVPWDSPFLNRIRENGIRIISEVELAFKYIKAPLIAVTGTNGKTTTTTLIGEMLKKDDRNVFVGGNIGNPMCEEVLNGSSSELILSEISTFQMEGIETFKPHISVILNITPDHMDRHKSMTEYIALKKRVFINQNTRDYTVFNMDDKITAALSNEGKGERIFFSRIREVDNGAFVRGNNIIFRRNRKEEIVSTLKDLKIIGVHNIENTLASVAVGGICDIPPRLMREVISEFSGIPHRMEFVREIEGIKFINDSKGTNVGATIKSIESFNEPIILIAGGKDKGSDYLPLKPLIEDRVKFLILIGEAKKKMASVMNGFRNILNAESFEEAVNEAFDKAEKGDVVLLSPACASFDMFRDYEDRGEQFRKIVESL*