ggKbase home page

RIFCSPHIGHO2_02_FULL_CP_39_82_rifcsphigho2_02_scaffold_3354_19

Organism: Nitrospinae bacterium RIFCSPHIGHO2_02_FULL_39_82

near complete RP 48 / 55 BSCG 49 / 51 ASCG 11 / 38
Location: comp(18379..19308)

Top 3 Functional Annotations

Value Algorithm Source
S-adenosyl-methyltransferase MraW; K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 309.0
  • Bit_score: 614
  • Evalue 1.10e-172
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=RSMH_HALOH similarity UNIREF
DB: UNIREF100
  • Identity: 53.7
  • Coverage: 307.0
  • Bit_score: 340
  • Evalue 2.10e-90
S-adenosyl-methyltransferase MraW similarity KEGG
DB: KEGG
  • Identity: 53.7
  • Coverage: 307.0
  • Bit_score: 340
  • Evalue 5.90e-91

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Nitrospinae_39_15 → Nitrospinae → Bacteria

Sequences

DNA sequence
Length: 930
ATGCTTCATATCCCTGTTCTTTTGGATGAAGTAATAAATCAACTTCAATGTCAGCAAAATAGAATATATGTAGATGCAACACTCGGAGATGGAGGACATGCAGAGGAGATATTAAAAAAAAGTTCTCCTTCAGGTATTTTGATAGGCATAGATAGGGATGAAGATTCCATAAGATTTGCAGAAAAGAGATTGTATTCATATAGAGAAAGAGTATTCCTTTTTCGTGAAAATTTTAGAAATATAAAGAATGTCATTAATAAGATAGAAATTTATAATGTAGATGGCGTTCTTTTTGATTTAGGTGTTTCGACAAGGCAATTTATGACTGCTGAAAGGGGGTTCAGTTTTTCTCGTGATGCACCTCTTGATATGAGGATGGACAGAAGCGACAATATGGTAGCAGAAGAGATTATAAATAATACTTCAGAAGAACAGTTAAGGGATATAATATGGAAGTATGGAGAAGAAAGATGGGCAGGGAGAATAGCCCGTTCTATAATCAGGGAGAGAGAGAAAATGCCTATCAAAACTACATTTCAGTTGGTAAAAATAGTAGTTTCTGCCATACCTCCTGCTTACAGGTCTAAGAGGATACACCCTGCGACAAAAACATTTCAGTCTATTAGAATAGCGGTAAACAATGAAATAGAAATATTAAAAGATACAATAAGAGATGCAATAGATATTCTCAATCCAGGTGGGAGGATATGTGTTATCTCTTATCATTCTCTGGAGGACAGGATTGTAAAAAATCTATTCAGAGAACTGGAGAGAGGATGTATATGCCCTCCCTCATTGCCTATATGTGTATGTGGAAGGAAGGGCATTATAAAGATAGTAACCAAGAGGCATATTGCCCCTTCCGAAGATGAGATTAAAAAAAATCCGAGGGCAAGGAGTGCCAAATTGAGGGGAGCAGAGAAGATTTAA
PROTEIN sequence
Length: 310
MLHIPVLLDEVINQLQCQQNRIYVDATLGDGGHAEEILKKSSPSGILIGIDRDEDSIRFAEKRLYSYRERVFLFRENFRNIKNVINKIEIYNVDGVLFDLGVSTRQFMTAERGFSFSRDAPLDMRMDRSDNMVAEEIINNTSEEQLRDIIWKYGEERWAGRIARSIIREREKMPIKTTFQLVKIVVSAIPPAYRSKRIHPATKTFQSIRIAVNNEIEILKDTIRDAIDILNPGGRICVISYHSLEDRIVKNLFRELERGCICPPSLPICVCGRKGIIKIVTKRHIAPSEDEIKKNPRARSAKLRGAEKI*