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RIFCSPHIGHO2_02_FULL_CP_39_82_rifcsphigho2_02_scaffold_42395_5

Organism: Nitrospinae bacterium RIFCSPHIGHO2_02_FULL_39_82

near complete RP 48 / 55 BSCG 49 / 51 ASCG 11 / 38
Location: comp(3800..4093)

Top 3 Functional Annotations

Value Algorithm Source
RNP-1 like RNA-binding protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 97.0
  • Bit_score: 193
  • Evalue 1.80e-46
RNA-binding proteins (RRM domain) id=5802739 bin=PER_GWA2_38_35 species=PER_GWC2_39_15 genus=PER_GWC2_39_15 taxon_order=PER_GWC2_39_15 taxon_class=PER_GWC2_39_15 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds) similarity UNIREF
DB: UNIREF100
  • Identity: 63.3
  • Coverage: 98.0
  • Bit_score: 119
  • Evalue 1.40e-24
RNP-1 like RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 55.3
  • Coverage: 94.0
  • Bit_score: 107
  • Evalue 2.00e-21

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Taxonomy

RLO_Nitrospinae_39_15 → Nitrospinae → Bacteria

Sequences

DNA sequence
Length: 294
GTGGCAAAGAAACTTTATGTGGGAAATATGTCCTACCAGACAACAGAGGATGATTTAACTACCCTCTTCAGTCAGGCGGGCAGTGTTGCATCTGTAAAGATAATCACAGATCAATATTCCGGACGTTCAAAGGGATTTGGTTTTGTTGAATTTTCTTCACAAGATGAGGCAGAGAAGGCAATATCCATGTTTAATGGCTATTCATTAAACGAAAGAAAACTGATTGTTAATGAGGCAAGACCCCAGACAACCAAAAGAAGCAGTTTTGGCGGCGGAAACAGAGGTAGATTCTAA
PROTEIN sequence
Length: 98
VAKKLYVGNMSYQTTEDDLTTLFSQAGSVASVKIITDQYSGRSKGFGFVEFSSQDEAEKAISMFNGYSLNERKLIVNEARPQTTKRSSFGGGNRGRF*