ggKbase home page

gwc1_scaffold_7348

Alias: GWC1_OP11_44_37_29

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwc1_scaffold_7348_1
GWD2_OP11_45_10, Collierbacteria, Microgenomates, Bacteria

Not on your lists

443..949
-----------------
DNA (507bp)
protein (169aa)
Tax=GWD2_OP11_45_10
gwc1_scaffold_7348_2
GWD2_OP11_45_10, Collierbacteria, Microgenomates, Bacteria

Not on your lists

1133..2134
-----------------
DNA (1002bp)
protein (334aa)
Putative uncharacterized protein Tax=GWD2_OP11_45_10
hypothetical protein
Putative uncharacterized protein
gwc1_scaffold_7348_3
GWD2_OP11_45_10, Collierbacteria, Microgenomates, Bacteria

Not on your lists

comp(2201..2491)
-----------------
DNA (291bp)
protein (97aa)
Tax=GWD2_OP11_45_10
gwc1_scaffold_7348_4
GWD2_OP11_45_10, Collierbacteria, Microgenomates, Bacteria

Not on your lists

comp(2620..2847)
-----------------
DNA (228bp)
protein (76aa)
Tax=GWD2_OP11_45_10
gwc1_scaffold_7348_5
GWD2_OP11_45_10, Collierbacteria, Microgenomates, Bacteria

Not on your lists

2979..3782
-----------------
DNA (804bp)
protein (268aa)
Tax=GWD2_OP11_45_10
gwc1_scaffold_7348_6
GWD2_OP11_45_10, Collierbacteria, Microgenomates, Bacteria

Not on your lists

3931..4362
-----------------
DNA (432bp)
protein (144aa)
Tax=GWD2_OP11_45_10
gwc1_scaffold_7348_7
GWD2_OP11_45_10, Collierbacteria, Microgenomates, Bacteria

Not on your lists

comp(4452..5717)
-----------------
DNA (1266bp)
protein (422aa)
5-methylaminomethyl-2-thiouridylate-methyltransferase; K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] alias=ACD61_46201.2446.14G0002,ACD61_46201.2446.14_2,ACD61_C00030G00002 id=91690 tax=ACD61 species=Finegoldia magna genus=Finegoldia taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=OP11 organism_desc=OP11
tRNA-specific 2-thiouridylase MnmA Tax=GWD2_OP11_45_10
hypothetical protein
gwc1_scaffold_7348_8
GWD2_OP11_45_10, Collierbacteria, Microgenomates, Bacteria

Not on your lists

comp(5714..6394)
-----------------
DNA (681bp)
protein (227aa)
Tax=GWD2_OP11_45_10
gwc1_scaffold_7348_9
GWD2_OP11_45_10, Collierbacteria, Microgenomates, Bacteria

Not on your lists

comp(6629..7294)
-----------------
DNA (666bp)
protein (222aa)
Tax=GWD2_OP11_45_10
gwc1_scaffold_7348_10
GWD2_OP11_45_10, Collierbacteria, Microgenomates, Bacteria

Not on your lists

comp(7339..8217)
-----------------
DNA (879bp)
protein (293aa)
Tax=GWD2_OP11_45_10
gwc1_scaffold_7348_11
GWB2_OP11_44_22, Collierbacteria, Microgenomates, Bacteria

Not on your lists

comp(8335..9294)
-----------------
DNA (960bp)
protein (320aa)
Alpha-L-glutamate ligase, RimK family {ECO:0000313|EMBL:KKT51101.1}; TaxID=1618387 species="Bacteria; Microgenomates.;" source="Microgenomates (Collierbacteria) bacterium GW2011_GWB2_44_22.;"
alpha-L-glutamate ligase
alpha-L-glutamate ligase, RimK family; K05844 ribosomal protein S6 modification protein alias=ACD61_24830.19977.11G0018,ACD61_24830.19977.11_18,ACD61_C00038G00018 id=91748 tax=ACD61 species=Ferroglobus placidus genus=Ferroglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota organism_group=OP11 organism_desc=OP11
gwc1_scaffold_7348_12
GWB2_OP11_44_22, Collierbacteria, Microgenomates, Bacteria

Not on your lists

comp(9456..10760)
-----------------
DNA (1305bp)
protein (435aa)
Alpha-L-glutamate ligase-like protein {ECO:0000313|EMBL:KKT51102.1}; TaxID=1618387 species="Bacteria; Microgenomates.;" source="Microgenomates (Collierbacteria) bacterium GW2011_GWB2_44_22.;"
alpha-L-glutamate ligase-like protein
alpha-L-glutamate ligase-related protein alias=ACD61_24830.19977.11G0017,ACD61_24830.19977.11_17,ACD61_C00038G00017 id=91760 tax=ACD61 species=Nitrosomonas europaea genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria organism_group=OP11 organism_desc=OP11
gwc1_scaffold_7348_13
GWD2_OP11_45_10, Collierbacteria, Microgenomates, Bacteria

Not on your lists

comp(10760..11617)
-----------------
DNA (858bp)
protein (286aa)
Putative uncharacterized protein Tax=GWD2_OP11_45_10
hypothetical protein
hypothetical protein alias=ACD61_24830.19977.11G0016,ACD61_24830.19977.11_16,ACD61_C00038G00016 id=91743 tax=ACD61 species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria organism_group=OP11 organism_desc=OP11
gwc1_scaffold_7348_14
GWD2_OP11_45_10, Collierbacteria, Microgenomates, Bacteria

Not on your lists

comp(11711..12445)
-----------------
DNA (735bp)
protein (245aa)
Putative uncharacterized protein n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q096V0_STIAU alias=ACD61_24830.19977.11G0015,ACD61_24830.19977.11_15,ACD61_C00038G00015 id=91759 tax=ACD61 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=OP11 organism_desc=OP11
DSBA-like thioredoxin domain-containing protein Tax=GWD2_OP11_45_10
nhaA3; DSBA-like thioredoxin domain-containing protein
gwc1_scaffold_7348_15
GWD2_OP11_45_10, Collierbacteria, Microgenomates, Bacteria

Not on your lists

comp(12508..13449)
-----------------
DNA (942bp)
protein (314aa)
leucyl-tRNA synthetase, eubacterial and mitochondrial family (EC:6.1.1.4)
aoe:Clos_2587 leuS; leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase [EC:6.1.1.4] alias=ACD61_24830.19977.11G0014,ACD61_24830.19977.11_14,ACD61_C00038G00014 id=91749 tax=ACD61 species=Alkaliphilus oremlandii genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=OP11 organism_desc=OP11
Leucine--tRNA ligase Tax=GWD2_OP11_45_10
Suspect SCG annotation. See neighboring gene [gwc1_scaffold_7348_16].
gwc1_scaffold_7348_16
GWB2_OP11_44_22, Collierbacteria, Microgenomates, Bacteria

Not on your lists


comp(13413..15233)
-----------------
DNA (1821bp)
protein (607aa)
leuS; Leucine-tRNA ligase (EC:6.1.1.4)
aoe:Clos_2587 leuS; leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase [EC:6.1.1.4] alias=ACD61_24830.19977.11G0014,ACD61_24830.19977.11_14,ACD61_C00038G00014 id=91749 tax=ACD61 species=Alkaliphilus oremlandii genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=OP11 organism_desc=OP11
Leucine-tRNA ligase {ECO:0000313|EMBL:KKT51105.1}; Flags: Fragment;; TaxID=1618387 species="Bacteria; Microgenomates.;" source="Microgenomates (Collierbacteria) bacterium GW2011_GWB2_44_22.;"
gwc1_scaffold_7348_17
GWD2_OP11_45_10, Collierbacteria, Microgenomates, Bacteria

Not on your lists

15238..15993
-----------------
DNA (756bp)
protein (252aa)
Alpha/beta hydrolase family protein Tax=GWD2_OP11_45_10
alpha/beta hydrolase family protein
alpha/beta hydrolase fold protein alias=ACD61_24830.19977.11G0013,ACD61_24830.19977.11_13,ACD61_C00038G00013 id=91758 tax=ACD61 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes organism_group=OP11 organism_desc=OP11
gwc1_scaffold_7348_18
GWD2_OP11_45_10, Collierbacteria, Microgenomates, Bacteria

Not on your lists

comp(15988..16515)
-----------------
DNA (528bp)
protein (176aa)
Tax=GWD2_OP11_45_10
gwc1_scaffold_7348_19
GWB2_OP11_44_22, Collierbacteria, Microgenomates, Bacteria

Not on your lists

comp(16533..17741)
-----------------
DNA (1209bp)
protein (403aa)
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000313|EMBL:KKT51859.1}; TaxID=1618387 species="Bacteria; Microgenomates.;" source="Microgenomates (Collierbacteria) bacterium GW2011_GWB2_44_22
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
gwc1_scaffold_7348_20
GWD2_OP11_45_10, Collierbacteria, Microgenomates, Bacteria

Not on your lists

comp(17757..18782)
-----------------
DNA (1026bp)
protein (342aa)
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase Tax=GWD2_OP11_45_10
UDP-N-acetylenolpyruvoylglucosamine reductase
gwc1_scaffold_7348_21
GWD2_OP11_45_10, Collierbacteria, Microgenomates, Bacteria

Not on your lists


18826..20136
-----------------
DNA (1311bp)
protein (437aa)
cms:CMS_2564 aspS; aspartyl-tRNA synthetase (EC:6.1.1.12); K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] alias=ACD24_C00068G00004,ACD24_4785.19731.19G0004,ACD24_4785.19731.19_4 id=27923 tax=ACD24 species=Clavibacter michiganensis genus=Clavibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria organism_group=WWE3 organism_desc=WWE3
Aspartyl-tRNA synthetase Tax=GWD2_OP11_45_10
hypothetical protein
Displaying 21 items

View Taxonomy