ggKbase home page

rifcsphigho2_02_scaffold_7789_6

Organism: candidate division WOR-1 bacterium RIFCSPHIGHO2_02_FULL_45_12

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: comp(4139..5422)

Top 3 Functional Annotations

Value Algorithm Source
glutamate synthase, NADH/NADPH, small subunit (EC:1.4.1.13); K00266 glutamate synthase (NADPH/NADH) small chain [EC:1.4.1.13 1.4.1.14] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 427.0
  • Bit_score: 888
  • Evalue 4.00e-255
gltD; glutamate synthase small chain (EC:1.4.1.13) similarity KEGG
DB: KEGG
  • Identity: 49.0
  • Coverage: 471.0
  • Bit_score: 460
  • Evalue 4.10e-127
Glutamate synthase, small subunit id=4321231 bin=GWC2_OP3_44_8 species=Clostridium ljungdahlii genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52 similarity UNIREF
DB: UNIREF100
  • Identity: 58.7
  • Coverage: 482.0
  • Bit_score: 566
  • Evalue 1.90e-158

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_WOR_1_46_20 → WOR-1 → Bacteria

Sequences

DNA sequence
Length: 1284
ATGGGAGATGTAAAAGGATTTTTAAAAATTAAGAGATCAAAAACAGAGTATCGCCCGGTTTGCGAGCGGGTGCTGGATTATCATGACGTGGTTAAGCCGCGTTCGGACGAACAATCCCGCGACCAGGCTTCGCGCTGCATGGATTGCGGCACCCCTTTTTGCCATTGGGCCTGTCCGCTGGCCAATTATATCCCAGAGTGGAATGACCTGGTCTTTCACCAGCAGTGGGAAAAAGCCTATGATTTGCTAAAAGCGACAAATATTTTGCCTGAAGTAACCGGCCGCGTTTGTCCGGCTCTGTGCGAGCATTCTTGTGTTTTGGGGATCAACGACGATCCCGTTACCATCCGAGAAAATGAGCTGGCGATTATAGAATATGCCTTTAAACATGGTTTGGTGAAGCCAGAATTGCCCAAAAAGCGCACCGGTAAAAAAATTGCTGTGGTTGGCTCAGGTCCAGCCGGATTATCCTGCGCTGTCCACTTAAATAGACAGGGCCACAAAGTTACAGTGTTTGAGCGTGATGATAAAGTTGGCGGGTTAATGCGTTACGGCATACCTGATTTTAAGTTGGAAAAGAAAATTCTTGACCGTCGCATTAGTGTTTGGAAAAAAGAGGGCCTTGTTTTCAAAACTAACCATGAAATTAAAGACAAAAAAGAGTTAAAAGGATTTGCTGCCGTATGTTTTGCTTGCGGCAGTCGTGTGCCGCGGGATTTAAAAGTGCCTGGCCGTGATTTAAAAGGGATCCACTTTGCCATGGATTATCTGGTGCGGTCCAATAAGTCTAAAAAAGCTGAAGCCAAAGGAAAAAAGGTTGTGGTAATTGGCGGCGGCGATACTGGCGCTGATTGCGTGGGCACAGCCAATCGTCAAGGAGCCAGTTGTGTGGTTCAGATAGAAATTATGCCGCAGCCAGCTGATCGCAGGACGGCAGATTGTCCCTGGCCGACTTTTCCCAGATTATTAAAGACAACCTCCAGCCATGAAGAGGGGGCGGAGCGGCACTGGTCAATTATTACAAGAAAGTTTGTTGGGAAAAATGGTAGAATAGGACAAATAATCTGCGAAAAGGATGGCCAGCCCTTTGCCATTGAAGCTGACTTAGTAATTTTAGCTATGGGGTTTATCGGGCCAGAGCCAATTAAGGGGTTAAACTCCAAAGATTTTACTTGCGGCGACATGCGGCGGGGTCAATCTTTAATTGTTTGGGCGATTCATGAAGGGGAAAATGCCGCTGAGGCGATTTCCAATTATCTTTTTTTGCGGGAACCAAAACGATAG
PROTEIN sequence
Length: 428
MGDVKGFLKIKRSKTEYRPVCERVLDYHDVVKPRSDEQSRDQASRCMDCGTPFCHWACPLANYIPEWNDLVFHQQWEKAYDLLKATNILPEVTGRVCPALCEHSCVLGINDDPVTIRENELAIIEYAFKHGLVKPELPKKRTGKKIAVVGSGPAGLSCAVHLNRQGHKVTVFERDDKVGGLMRYGIPDFKLEKKILDRRISVWKKEGLVFKTNHEIKDKKELKGFAAVCFACGSRVPRDLKVPGRDLKGIHFAMDYLVRSNKSKKAEAKGKKVVVIGGGDTGADCVGTANRQGASCVVQIEIMPQPADRRTADCPWPTFPRLLKTTSSHEEGAERHWSIITRKFVGKNGRIGQIICEKDGQPFAIEADLVILAMGFIGPEPIKGLNSKDFTCGDMRRGQSLIVWAIHEGENAAEAISNYLFLREPKR*