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rifcsphigho2_02_scaffold_2484_7

Organism: candidate division WOR-1 bacterium RIFCSPHIGHO2_02_FULL_45_12

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: 5300..6562

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 interaction domain protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8EWB0_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 31.8
  • Coverage: 437.0
  • Bit_score: 249
  • Evalue 5.10e-63
Fis family transcriptional regulator; K02667 two-component system, NtrC family, response regulator PilR Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 420.0
  • Bit_score: 809
  • Evalue 3.00e-231
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 33.2
  • Coverage: 437.0
  • Bit_score: 234
  • Evalue 4.80e-59

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Taxonomy

R_WOR_1_46_20 → WOR-1 → Bacteria

Sequences

DNA sequence
Length: 1263
ATGCATAATATTTTAATCGTCGACGATGAGTATTCCATCAGGGAATCCTTCTCTTTAATCCTCGAAGGAACCCACAAAATATTATTAGCGGCATCCGGAGAGGTCGCGCTCAAAACAATAGCTGACCAGAAAGTTGACATGGCCTTTCTGGATATTCGTATGCCGGGCATGAATGGCCTGGAAACCCTCAAAAGGATTAAAGAGATTGACCCGGATATTGAAGTCGTTATGGTCACGGCAGTCAACGACGTGCAAAAAGCCAGTGAAGCCATCAAGCTCGGGGCGCGCGATTATGTAATTAAACCTTTCGATGTGGACCATATCACCAAACTGGCTCAACAAATCCTAAGGAAAAAAAGCATTCAGCAACAAAGCGAAAAAATTCAAAACATAGCCGGACTAAAACTACCTGAACTTATCGGCCCAGGCGAAAAAATACTGGCGGTTATAAAATCCCTTGGCGAGATCAAAGACCATGAGCGTGTGCTCATTAGCGGGGAAACTGGCACAGAGAAAGAAACTATCGCCCAAATTATTCACGCTAAAAGCAGTCAGAGCACCCTGCCCTACCAGGCCACGCAGCTCTCCAGCCTAATGACACCAGCCAGGATAAAAGCTTTGCTTTTTGGCTGGGGCAAAGGGGAGAGCACCGTCGCGCTTGATGCCAAAAGCGGGCTTATTGAGCAGGTTAAAGGCGGAACACTTTTTATAGATAACATCGAAACCCTGCCGGCAGAAATTTTTAAAACAATTTCTTCATTAGAATTTTCTCGCAGCGATGATTCAACAAAAATACCCCTCAAGGCGCGCCTTATTTGCGGTTCCAGTTCTAATCTGGAAAGCACTATGCAGGCTTTCTTTGCTCAAGCTCACATCCAGGTTCCTGCCTTGCGCGAAAGAAACTCAGACATCCCCTTTCTCATCAATCATTTTGTTGAACAATACGGCACACAGTATGGCCAGGATACCAGGATCAGCACCGAAGCCCTGAAAGCTTTGAACAGTTACACCTGGCCAGGCAATACGCAACAATTAGCAAGTGTAATCAAACGGCTTGTCCTTTGTTCTTCGACAGGAAAAGTAGATGTGGACGACCTGCCCCTCGATATCCTCCTTAAAACCAGCGAAGCAGCCGGCAGCAATTTTATTTCCGCTTTTGAAAAAGAATATATTCGCGCTACATACAAAAAGTGTGGCAAGAACAAAGAAAAAGCTGCCAACCTCCTGGAAATTAACCCCTATTTGCTGGAAACAAAGTTGTAA
PROTEIN sequence
Length: 421
MHNILIVDDEYSIRESFSLILEGTHKILLAASGEVALKTIADQKVDMAFLDIRMPGMNGLETLKRIKEIDPDIEVVMVTAVNDVQKASEAIKLGARDYVIKPFDVDHITKLAQQILRKKSIQQQSEKIQNIAGLKLPELIGPGEKILAVIKSLGEIKDHERVLISGETGTEKETIAQIIHAKSSQSTLPYQATQLSSLMTPARIKALLFGWGKGESTVALDAKSGLIEQVKGGTLFIDNIETLPAEIFKTISSLEFSRSDDSTKIPLKARLICGSSSNLESTMQAFFAQAHIQVPALRERNSDIPFLINHFVEQYGTQYGQDTRISTEALKALNSYTWPGNTQQLASVIKRLVLCSSTGKVDVDDLPLDILLKTSEAAGSNFISAFEKEYIRATYKKCGKNKEKAANLLEINPYLLETKL*