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RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_3227_27

Organism: Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_42_100

near complete RP 46 / 55 BSCG 48 / 51 ASCG 11 / 38
Location: 12343..13359

Top 3 Functional Annotations

Value Algorithm Source
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 338.0
  • Bit_score: 665
  • Evalue 3.30e-188
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 67.8
  • Coverage: 338.0
  • Bit_score: 476
  • Evalue 5.80e-132
DNA-directed RNA polymerase subunit alpha n=1 Tax=uncultured bacterium RepID=K2ETR9_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 338.0
  • Bit_score: 666
  • Evalue 1.80e-188

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Taxonomy

R_Alphaproteobacteria_42_30 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1017
GTGATACAGAAAAATTGGCAGGCTCTGATTAAGCCCTATAAGTTAAATTTGGATCATAGTGAAAATCCAGATTATGTAGCAACCATAACAGCAGATCCTTTAGAACCAGGTTTTGGTGTTACCTTGGGCAGTGCTTTAAGACGCATTTTGCTATCCTCTCTTCAAGGGTCAGCTATTACTTCTGTGCAAATGGATGGTGTGCTCCATGAGTTCTCCACAATTCCAGGGGTGAATGAAGATCTAACGGATATTGTCCTCAATCTAAAGGGGGTTGTCACAAAACTCCATAAAATAGGAACCGTAAAGGTAAAGCTCCAAGCAGAAGGTCCTTGTGTTGTAACGGCGGGTCAAATTGAAACCACAGCAGATTTAGAAATTTTGAACAAAGATCACTATATTTGCACTTTAGGGCAGGGGGCTAAGATTTTAATGGAGCTGACCATCAGTTCTGGGAAAGGCTATATACCTGCTGAGAGCAATAAAAAAGCTGATTCACCCATCGGGTATATTCCTATTGATGCTCTCTACAGCCCAGTACGTAAAGTTTCTTATAAGGTTGAGAATACGCGCGTAGGGCAACAAACAAACTTTGACAAGCTCATTATGCGCGTTGAAACAGATGGATCCGTTCGCCCAGATGATGCCGTTGCTTTAGCTGCGCGGATTTTGCAAGATCAGCTCCAAAAATTTATTAACTTTGAAGAGCCTAAGGAAGCTTATGTTGAGAAAGAAGATTCGCTCATTCCCTTCAATAGAGCTCTTTTGCGTAAAGTGGAGGAATTGGAGCTTTCCGTTCGTTCAGCCAACTGTCTTAAAAACGACAACATTATTTACATAGGTGATTTGGTCCAAAAGACAGAAGGCGAAATGCTTCGGACACCAAACTTTGGCCGTAAGTCCTTAAATGAAATTAAGGAAGTGCTCAGCCAAATGGGGTTGAGTTTGGGTATGGATGTGCCAAGTTGGCCGCCAGAAAATATTGAAGAGCTGATTAAAAAGCTCGATGAGCCCTTTTAA
PROTEIN sequence
Length: 339
VIQKNWQALIKPYKLNLDHSENPDYVATITADPLEPGFGVTLGSALRRILLSSLQGSAITSVQMDGVLHEFSTIPGVNEDLTDIVLNLKGVVTKLHKIGTVKVKLQAEGPCVVTAGQIETTADLEILNKDHYICTLGQGAKILMELTISSGKGYIPAESNKKADSPIGYIPIDALYSPVRKVSYKVENTRVGQQTNFDKLIMRVETDGSVRPDDAVALAARILQDQLQKFINFEEPKEAYVEKEDSLIPFNRALLRKVEELELSVRSANCLKNDNIIYIGDLVQKTEGEMLRTPNFGRKSLNEIKEVLSQMGLSLGMDVPSWPPENIEELIKKLDEPF*