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RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_2788_1

Organism: Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_42_100

near complete RP 46 / 55 BSCG 48 / 51 ASCG 11 / 38
Location: 2..1852

Top 3 Functional Annotations

Value Algorithm Source
Leucine Rich Repeat family protein Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 614.0
  • Bit_score: 1205
  • Evalue 0.0
id=3443353 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + similarity UNIREF
DB: UNIREF100
  • Identity: 79.5
  • Coverage: 190.0
  • Bit_score: 308
  • Evalue 1.30e-80
internalin A-like protein/S-layer protein similarity KEGG
DB: KEGG
  • Identity: 26.2
  • Coverage: 413.0
  • Bit_score: 75
  • Evalue 7.10e-11

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Taxonomy

R_Alphaproteobacteria_42_30 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1851
GAGCAGCAATCTCCTGGTCTTGCCAATGCAGGAGATATTGACATACGTTCCTCATGGAACCGGGTTATTGGAGATTTAAATGAAGACAAAACTAACCCAGTGATTCGATATGTACACGATAGTCAGTACGAGTTTGAGACAGGATATTTTAACCTTTTGCGAGCTTTTCAACATATTTTTTCCCTTGAGCTCACTCCTTTTCCAAAAGAAGGGGAGAAGATAGAAAAACAAAAGGATAGTCTTGAAAATGCTTTTAAAGAGCTATTTAAATTTCTGAATCCTTCATCTACAATTCAAATAGATTGTTCCAAAGTATGGCCTGAAAAAACAACGGAAAACGAAACTGATCTATTCGGAGGGGGAGCTGTTACAGGACGATTTTCTGAAAAATTTTTTCCTTATTCTTTCGATATTAAAATGACGCAAGGCCATTCTGAGCTTAAAAATGTTAAAGTTGGAAAAATAACAGAGGATCTAGATTCTAAACATCCTACAATGGTTAAAGGGCACACAGCAGAAGAAACACTCTACCTTTTGTCACAGGATTTTAGTCCTTCTATAACAGTTCCTCTTTATAAACTTTATAACCACGCCTTGGCCGACAACGACTCAAGGCTCGATTTTATTGAGGCCCTAGCGTCTCAATGGAAAGCCATCGTAGGTGAAACGGGTGGAGAATTCCTGAAAGACAAGCTTTCTTTAATGCTTAAAAACGTTCTCTCTTCTCTTTCCTGGGAAGATAATTCCATTGCAGAGAAATATACAATATTACTAAGCAAACTTTTTAAGAATTTTGAAAAAAACCCAAACGATGATTTAAAAAATGTACTCCTTCAGAATACTTTGACCATCCGTTTCCAACGTTATTCAGATACGACATACTTTGATCTCCAATATTTCTCTAAAATAAAGAAATTAGAGTTATCTGAAGGAACGCATTCATTAACTTTTTCAGAAATGAACACGGCCTTAGAAGAACTGGTCTTTGACAAAGCTGGTATTACAATTAAAGGTATTGAGCACCTTTCGGCTTTAAAAAAGTTAATATTTAAAACATATTCTTCAGAAACAGAACGTAAGCTTATGCGAAAATTCTATCGGTACGAACTCGGCCCACTAACCTTTTCAGCAGAAAATAAGAATTTGGAAGAACTCATCTTTCGCGGGAAAGTTAATAGTATTACAGGCCTTGAACACCTTTCTGCATTAAAAAAGTTAATAGTTGAAGCAGAAGGAGTCGGCCCACTAACCTTTTCAGCAGAAAATAAGAATTTGGAAGAACTCATCTTTCGCGGGAAAGTTAATGGTATTACAGGCCTTGAACACCTTTCGGCATTAAGAAAGTTAATAGTTGAAGCAGGAGGAGTCGACTCACTAACCTTTTCAGCAAAAAATGAGAAGTTGGAAGAACTCAACTTATGGAAGTCTAAAATTACGAGCATTACAGGCCTTGAACATCTTTTGGCATTAAAGAGGTTAAATGTTTCAGATACATCAGGCCTCACATCCTTAACCCTTTCAGGAAATAAGAATTTGGAAGAACTCAACTTACGTCTCTCTGGAGTTAAGAGTCTTATAGGCCTTGAAGAGCTTCCCAAATTAAAGTCCTTAGATGTTTCAGGGACACCCATTAAAGAATTGATTTTTTCGGGAAAAAACTCAAATTTTGAAATCCTTGAAGCCGCTTTTTGCACTTGCCTCACTAAGATAGAAAATCTACACCTCCTACCAAAACTTAAAACCCTTAATCTTGAAGGATGTAATCAACTTCAGGAAGTCAAAGTAAAAAAAGGCGTTAATATTACAGGTCGTCCACTCAGCTTAAAAGTAACAGAAGTGGAAGATATATAA
PROTEIN sequence
Length: 617
EQQSPGLANAGDIDIRSSWNRVIGDLNEDKTNPVIRYVHDSQYEFETGYFNLLRAFQHIFSLELTPFPKEGEKIEKQKDSLENAFKELFKFLNPSSTIQIDCSKVWPEKTTENETDLFGGGAVTGRFSEKFFPYSFDIKMTQGHSELKNVKVGKITEDLDSKHPTMVKGHTAEETLYLLSQDFSPSITVPLYKLYNHALADNDSRLDFIEALASQWKAIVGETGGEFLKDKLSLMLKNVLSSLSWEDNSIAEKYTILLSKLFKNFEKNPNDDLKNVLLQNTLTIRFQRYSDTTYFDLQYFSKIKKLELSEGTHSLTFSEMNTALEELVFDKAGITIKGIEHLSALKKLIFKTYSSETERKLMRKFYRYELGPLTFSAENKNLEELIFRGKVNSITGLEHLSALKKLIVEAEGVGPLTFSAENKNLEELIFRGKVNGITGLEHLSALRKLIVEAGGVDSLTFSAKNEKLEELNLWKSKITSITGLEHLLALKRLNVSDTSGLTSLTLSGNKNLEELNLRLSGVKSLIGLEELPKLKSLDVSGTPIKELIFSGKNSNFEILEAAFCTCLTKIENLHLLPKLKTLNLEGCNQLQEVKVKKGVNITGRPLSLKVTEVEDI*