ggKbase home page

RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_1484_19

Organism: Candidatus Muproteobacteria bacterium RIFCSPHIGHO2_12_FULL_60_33

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(25518..26639)

Top 3 Functional Annotations

Value Algorithm Source
LysM domain protein n=1 Tax=Methylophaga thiooxydans DMS010 RepID=C0N5G3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 41.8
  • Coverage: 364.0
  • Bit_score: 290
  • Evalue 3.00e-75
LysM domain protein n=1 Tax=Methylophaga thiooxydans DMS010 RepID=C0N5G3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 41.8
  • Coverage: 364.0
  • Bit_score: 290
  • Evalue 3.00e-75
peptidoglycan-binding LysM Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 373.0
  • Bit_score: 748
  • Evalue 4.30e-213

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Gamma2_60_33 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1122
ATGTCGCCTAAGCCTCTACGGGGAACCCGCTTTTTCCTTCTTATTACTGCGCTGCTCCTGGCTGCTCCCGTTCAGGTGCGGGCGGACGAGGTTCAGCTCAAGCCCGATCACCCCGAACGTTATACCGTGGTCAAGGGCGACACCTTGTGGGACGTCTCCACCCGGTTTCTCAAGAGCCCCTGGCACTGGCCGAAGATCTGGAAGATCAACGACCAGATCAAAAATCCGCATCTGATTTATCCCGGCGACGTGGTGGTGCTGCGCATGGTGGATGGCAAGCCGGTGTTGACCGTGGAGCGCAAGGACAAGGCGTCGGGCTTGCCTTCGTTGCCCGAGGCCGCCAAGGCACCCGATGCGCCCGTGGGGGAACGGCGCGTCGATGACCGTACGGTGAAACTCTCCCCGCAAGCGCGCAGCGAACCGCTCGAAGCGGCCATTCCCACCATTCCCCCGAACGCCATCGTTCCGTTTCTGACGCGGCCGCTGGCGGTGGAGGAAAATGAACTCGAGCAGGCCGGTTATATCACCACCGGGCTCGATGACCGCATCGCACTCGGCGACAGCAGCCAGTTCTACGCCCGTGGCCTGCAGGACGACGCTGCGGAGTACTACCAGATTTTCCGCCCGGGCAAGCCTATCCGTCATCCCGATACCGGCGAGTTGCTGGCCTACGAGGCCTTGTATCTGGGCGACGCGAAACGTCTCGAGACGGGCGACCCGAGCAAGCTCGTGGTGACCGCGGTCAAGCAGGAAATCATCCCGACCGACCGTTTGCTGACAGCCCCGAAAAAGGCCTCACTGCCCTATTACTATCCGCATGCGCCCAAGACCCAGGTGCAGGGAAGAATCGTCTCGGCCCTGAACGCCGTGGCCGAGATCGGTCCGCAAACCGTGGTCGGCATCTCGCTCGGCGCGCGCGAAGGCATCGAGGAAGGCAACGTGCTGCGCATCATGCGCCATGTCGGCACCCACAAGGACCCGCTGACGCGCGAGCGTTACAAGCTGCCGGACGAGGAATCCGGGCTGCTGCTCATTTTCCGTACCTACGAAAAAATGAGCTATGGGCTCGTGATGACGGCCACCCGCCCGGTGCACCTGCTGGACGCGGTTATCACGCCCTGA
PROTEIN sequence
Length: 374
MSPKPLRGTRFFLLITALLLAAPVQVRADEVQLKPDHPERYTVVKGDTLWDVSTRFLKSPWHWPKIWKINDQIKNPHLIYPGDVVVLRMVDGKPVLTVERKDKASGLPSLPEAAKAPDAPVGERRVDDRTVKLSPQARSEPLEAAIPTIPPNAIVPFLTRPLAVEENELEQAGYITTGLDDRIALGDSSQFYARGLQDDAAEYYQIFRPGKPIRHPDTGELLAYEALYLGDAKRLETGDPSKLVVTAVKQEIIPTDRLLTAPKKASLPYYYPHAPKTQVQGRIVSALNAVAEIGPQTVVGISLGAREGIEEGNVLRIMRHVGTHKDPLTRERYKLPDEESGLLLIFRTYEKMSYGLVMTATRPVHLLDAVITP*