ggKbase home page

cn_combo_scaffold_2097_16

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: comp(13087..13620)

Top 3 Functional Annotations

Value Algorithm Source
sigma-70 family RNA polymerase sigma factor id=12498535 bin=THIO_MID species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 178.0
  • Bit_score: 360
  • Evalue 8.60e-97
sigma-70 family RNA polymerase sigma factor Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 76.6
  • Coverage: 175.0
  • Bit_score: 288
  • Evalue 7.60e-75
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 76.9
  • Coverage: 169.0
  • Bit_score: 272
  • Evalue 6.60e-71

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGAGCTGTCTGATGAACGCCTGGGGCGAGCATGAAGCCGAACTGCGCGGCTGGCTGCGCAGTAGATTGGGCAATGCTCACGATGCCGAGGACATGCTGCAGGACCTGTTTCTCAAGGCTATGCGCCAGGACAGAAAATTCTGCGAGATCGCCAATGCGCGCGCCTGGCTGTTCGAAGTGGCGCGCAACGCCATCGCCGACCGCCTGCGCCTGAAAAAGGACCAGGTCGAATTGCCGGACGATCTCGTCGCCGAACACGACGAGCCCGCCGCGGTGGAATCCCTGGCCGCCTGCCTGCCGCGCGCGCTGTCCGAGCTGTCGGACGAGGACCGTGAGGCCATCACCCGTTGCGACCTCGAAGGCATGAGCCAGGAGGACTACGCGCATTTGAAAGGGCTCACCTTGCCCGGCGCCAAATCGCGCGTGCAGCGCGCACGCAAGCGGCTGCGCGAGGATCTCAGCGACGCCTGCCAGGTGAAGTTCGACGCGGCGGGCAAGGTCTGCTGCTTCGTGCCGCGCGGCGACAAGTCCTGA
PROTEIN sequence
Length: 178
MSCLMNAWGEHEAELRGWLRSRLGNAHDAEDMLQDLFLKAMRQDRKFCEIANARAWLFEVARNAIADRLRLKKDQVELPDDLVAEHDEPAAVESLAACLPRALSELSDEDREAITRCDLEGMSQEDYAHLKGLTLPGAKSRVQRARKRLREDLSDACQVKFDAAGKVCCFVPRGDKS*