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cn_combo_scaffold_12342_10

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: 4753..5181

Top 3 Functional Annotations

Value Algorithm Source
nodulation protein NodJ n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0003135519 similarity UNIREF
DB: UNIREF100
  • Identity: 71.7
  • Coverage: 138.0
  • Bit_score: 203
  • Evalue 1.40e-49
nodJ; ABC-2 type transport system permease; K09694 lipooligosaccharide transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 72.8
  • Coverage: 136.0
  • Bit_score: 201
  • Evalue 7.50e-49
ABC-2 type transporter, NodJ family similarity KEGG
DB: KEGG
  • Identity: 66.4
  • Coverage: 140.0
  • Bit_score: 200
  • Evalue 2.60e-49

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Taxonomy

R_Burkholderiales_57_36 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 429
ATGGGCGTCCCGGGAATCTTCGCGCTGCCCCGGCCGTCGATGCGGTGGCTGCCGGTGTACCTGCGCAACCTGCGGGTGTGGCGCAAGCTCGCGCTGGCCAGCGTGGTGGGCAACATCGCGGATCCGCTGATCGTGCTGGTGGCCTTCGGCTACGGCCTGGGCCGCCTGCTGCCCGAGGTGGCCGGCGTTCCCTACATCCTCTTCCTGGCGGCCGGCTCGCTGTGCATGAGCACGATGACCGCCGCGAGCTTCGAGTCGCTGTACTCGGCCTTCTCGCGGATGCACGTGCAGAAGACCTGGGAGTCGCTGCTCAACGCTCCGCTCGAGCTCGACGACGTCGTGCTGGCCGAGTGGCTCTGGGCGGCCACCAAGAGCCTGTTCTCCGGCGTCGCGATCATGGCGGTCGTGTGGGTGCTCGGCATCTCGCGC
PROTEIN sequence
Length: 143
MGVPGIFALPRPSMRWLPVYLRNLRVWRKLALASVVGNIADPLIVLVAFGYGLGRLLPEVAGVPYILFLAAGSLCMSTMTAASFESLYSAFSRMHVQKTWESLLNAPLELDDVVLAEWLWAATKSLFSGVAIMAVVWVLGISR