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cn_combo_scaffold_2530_5

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: 3623..4411

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Pseudomonas sp. GM55 RepID=J3AZP6_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 53.0
  • Coverage: 230.0
  • Bit_score: 231
  • Evalue 8.90e-58
Transcriptional regulator {ECO:0000313|EMBL:EJM74863.1}; TaxID=1144333 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 53.0
  • Coverage: 230.0
  • Bit_score: 231
  • Evalue 1.20e-57
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 42.8
  • Coverage: 243.0
  • Bit_score: 190
  • Evalue 6.40e-46

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Taxonomy

Pseudomonas sp. GM55 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 789
GTGGAATTCGAGACAGATAGACCGCAGGAAAGCAGCGCCGAAGATTTCCAACTTTCGGAACAAGCGGCTGTGCCGCTCTTCCGGCAGGTCGCCGACATGATCCAGGGACGCATCGTGGCGGGCGAACTGCGTCCGAACGAAGTCCTGCCTTCGGAAGGAGCGCTCGCAGCCCAGCTCGGCGTGCATCGCTCAAGCGTGCGCGAAGCGATCCGCTCCCTGGAAGAGCAGGGATACGTTCACAGGCCGCAGGGCAAGCGCAAGCTCTACGTCTCGATACCCAGCACCCAGGTTCTTTCCCGCAAGCTCATCGAGCCGCTTGTTCTCAATCAGACGAGTTTCGAAGAGCTGTGGGAAGCCATCCGCGCGCTCGACCCTGCTGCCGCCGCCGCAGCCGCCCGCAGGCGCAGCGCCGGGCATGTCGAGGAGCTCGAGGACAACCTGAAGCGGTCGCGCGCCGTAATCGACGACCACGAAAGGCTGACACGACTCGACATCGAATTTCACGAGATCGTGGCACGGGCTGCCGGCAACCAGGTCATCGAGGCGATCCGGCTGCCGATCAGCGACCTCTTCTATCCGTCGTTCCAGACGGTCATGTCGCGACTGAATGCCGGCGACCGCCTGCTGAAAGCGCATGAGAAGATCGTCGAGGCGATCAAATGGAGCGACGCCGAAGAGGCGGAGACATGGATGATCAAGCATATCAACGACTTCCGCAAGGGATACGAGCTTGCGCGGTTGGATATGTCCGCATCCGTAGTGCTGCCGAAAGAGAATGCTCATGTCTGA
PROTEIN sequence
Length: 263
VEFETDRPQESSAEDFQLSEQAAVPLFRQVADMIQGRIVAGELRPNEVLPSEGALAAQLGVHRSSVREAIRSLEEQGYVHRPQGKRKLYVSIPSTQVLSRKLIEPLVLNQTSFEELWEAIRALDPAAAAAAARRRSAGHVEELEDNLKRSRAVIDDHERLTRLDIEFHEIVARAAGNQVIEAIRLPISDLFYPSFQTVMSRLNAGDRLLKAHEKIVEAIKWSDAEEAETWMIKHINDFRKGYELARLDMSASVVLPKENAHV*