ggKbase home page

cn_combo_scaffold_3459_4

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: comp(2462..3025)

Top 3 Functional Annotations

Value Algorithm Source
pcaG_1; protocatechuate 3,4-dioxygenase subunit alpha (EC:1.13.11.3); K00448 protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.9
  • Coverage: 191.0
  • Bit_score: 299
  • Evalue 3.50e-78
Protocatechuate 3,4-dioxygenase, alpha subunit n=2 Tax=Pseudomonas RepID=J2M2D3_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 47.6
  • Coverage: 187.0
  • Bit_score: 177
  • Evalue 1.10e-41
protocatechuate 3,4-dioxygenase similarity KEGG
DB: KEGG
  • Identity: 48.1
  • Coverage: 187.0
  • Bit_score: 176
  • Evalue 6.80e-42

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Alphaproteobacteria_66_14 → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 564
ATGAGCCGCGCCCTCACACCGTCGCAGACGATTGGCCCTTTCTACTTCGGCACGCTCGTCCATGCCCATCGTCAGGACCTTGCACCGCGAGGCATTGCAGGCGAGTGGCTGGAGATCGAACTCAGCCTCCATGACGCGGACGGCGAGATCGTGCCCGATGGCGTGTTCGAGATCTGGCAGGCCAACAGCCACGGCCGCTACGACCACCCCGAGGATCGCCGCAACCTGCCGCTCGATCCTGGTTTCGACGGGTTCGGTCGCGCTTCGACCGACACCGCGGGCCGCGCGACCTTCGGCACCGTCAAGCCCGGCCGCGTGCCCTGGCCGGCGGGGGGCTTGCAGGCATCGCACATCAATGTCTCGGTGTTCGCGCGCGGTGTGCTCAACCGGCTGGCGACGCGGCTCTATTTCGAGGGCGATCCCGAACTGGCCGAGGATCCCGTGCTGAAGCTGGTCGAGCCCGCCCGTCGCGCCACGTTGATCGCCAAGCGCGATGCCTCGGGAGTCTGGAGGTTGCCCATCCATCTGGGCGGAGCGCACGAAACCGTCTTCTTCGACTGCTGA
PROTEIN sequence
Length: 188
MSRALTPSQTIGPFYFGTLVHAHRQDLAPRGIAGEWLEIELSLHDADGEIVPDGVFEIWQANSHGRYDHPEDRRNLPLDPGFDGFGRASTDTAGRATFGTVKPGRVPWPAGGLQASHINVSVFARGVLNRLATRLYFEGDPELAEDPVLKLVEPARRATLIAKRDASGVWRLPIHLGGAHETVFFDC*