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cn_combo_scaffold_3459_5

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: comp(3022..3618)

Top 3 Functional Annotations

Value Algorithm Source
protocatechuate 3,4-dioxygenase subunit beta; K00449 protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 79.1
  • Coverage: 196.0
  • Bit_score: 331
  • Evalue 8.70e-88
protocatechuate 3,4-dioxygenase subunit beta n=1 Tax=Pseudomonas mandelii RepID=UPI0003603E4B similarity UNIREF
DB: UNIREF100
  • Identity: 73.1
  • Coverage: 197.0
  • Bit_score: 304
  • Evalue 6.30e-80
protocatechuate 3,4-dioxygenase subunit beta similarity KEGG
DB: KEGG
  • Identity: 73.0
  • Coverage: 196.0
  • Bit_score: 302
  • Evalue 6.70e-80

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Taxonomy

R_Alphaproteobacteria_66_14 → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 597
GTGCTGCCGCACAGCCTGTCGGAGATCACCGGCCCGTCGCTGCGCGCGGCGCGGCTGGATGCCGGCGAGAACGACCTGACGCGCCAGCGCATGGGTGAGCCGCTCGGCGAGCGCATCATCGTGCAGGGGCGCGTCCTCGATCAGGATGGCAGGCCGGTGCCCGAGGCGCTGGTCGAGATCTGGCAGTGCAATGCCGCCGGTCGCTATCACCATCCCGGCGACCAGCACGATGCGCCGCTCGACCCGAACTTTTACGGCGGCGGCCGCACCCGCGCCGATGCCGAGGGCAATTACAAGTTCGTCACTATCAAGCCCGGCGCCTATCCCTGGAAGAACCACCACAATGCCTGGCGTCCGGCGCACATCCATTTCTCGTTGTTCGGGCCGGCCTTCGCCACCCGTCTGATCACGCAGATGTATTTCCCCGGCGATCCGCTGTTGTCTTTCGACCCGATCTACAATTCGGTGCCCGAGGGCGCGCGGGCGCGCCTGCAGGCAGCCTTCGACATGGAGGCGACGCAACCGGAATGGGCGCTGGCCTATCGCTTCGACATCGTGCTGCGCGGTCGCAATGCCACGCCGATGGAGATCCCATGA
PROTEIN sequence
Length: 199
VLPHSLSEITGPSLRAARLDAGENDLTRQRMGEPLGERIIVQGRVLDQDGRPVPEALVEIWQCNAAGRYHHPGDQHDAPLDPNFYGGGRTRADAEGNYKFVTIKPGAYPWKNHHNAWRPAHIHFSLFGPAFATRLITQMYFPGDPLLSFDPIYNSVPEGARARLQAAFDMEATQPEWALAYRFDIVLRGRNATPMEIP*