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cn_combo_scaffold_3980_6

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: comp(5046..7517)

Top 3 Functional Annotations

Value Algorithm Source
VirB4 family type IV secretion/conjugal transfer ATPase n=4 Tax=Pseudomonas aeruginosa RepID=N2D3B7_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 92.5
  • Coverage: 822.0
  • Bit_score: 1533
  • Evalue 0.0
Conjugal transfer protein TrbE {ECO:0000313|EMBL:KIZ32666.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas st similarity UNIPROT
DB: UniProtKB
  • Identity: 92.1
  • Coverage: 822.0
  • Bit_score: 1535
  • Evalue 0.0
type IV transport system protein VirB similarity KEGG
DB: KEGG
  • Identity: 91.8
  • Coverage: 821.0
  • Bit_score: 1519
  • Evalue 0.0

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Taxonomy

Pseudomonas stutzeri → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2472
ATGCTGAACCTTGCCGAATACCGCCAGCGCCCGGCCTTGCTTGCCGACTGGCTGACTTGGGCCGGGCTGGTGGCGCCGGGTGTCATCCTGAACAAGGACGGCAGTTTCCAGCGCACGGCCCGGTTTCGCGGGCCTGACCTGGACAGCGCCACGCAGGGCGAGCTGATTTCCACGTCAGCGCGGCTGAACAACGCGCTGCGCCGCCAGGGTTCGGGCTGGGCGCTGTTCATCGAGGCCGAGCGCCGCGCCGCGGCCGACTATCCGCACTCCGAGTTTCCCGAGCCGCTGTCATGGCTGGTGGACGAGGAGCGCCGCGCAGCGTTTGAGGATTCGGGCAATCACTTCGAGAGCGGTTATCACCTGACGCTGGTGTACCTGCCGCCCGAAGAATCCCGCGCCCGTGCCGCCGGGATGCTGTACGAGAACCGGCCCACCGAAGGCGTGGACTGGCGCGAACGCCTCTCGGCCTTCGTCGCGGAAACGGATCGCATCTTCGATCTGCTCGATGGCGTGATGCCGGAAATCGTGTGGCTCGATGACAGCCAGACGCTGACCTACCTGCACGCCACGGTCTCGACGCGGAGCTACCGCGTGGGCGTCCCGGAAGTGCCATTCCATCTCGACGCGCTGCTGGCCGATTCCGCGCTCATTGGCGGGCTGGCGCCGATGCTGGGCGACCAGCACTTGCGGGTGGCGACGGTACGGGGATTTCCGACCTCGACCTGGCCGGGAATTCTGGACGACCTCAACCGCCTGGGCTTTGCCTATCGTTGGAGTACGCGATTTTTGTGCCTCGACAAAGCCGAGGCGGAAAGGGAATTGGGGCGCCTGCGCCGCCAGTGGTTCGCGAAGCGCAAGAACGTCATCGCACTGCTGCGCGAAACCATCTTCCAGCAGGAGTCCCCGCTGGTCGATACCGACGCCAGCAACAAAGCGGCTGACGCCGATGCCGCCTTGCAGGAGCTGGGCAGCGATCAGGTTTCCTTCGGCTACCTCACGGCAACTGTCGCCGTCATGGACGCGGATGCCGCCGTGGCCGACGAGAAGCTGCGCATGGTGGAGCGCGTCATCCAGGGTCGGGGCTTCGTGACCATCCCCGAAACGCTCAACGCCGTGGATGCGTGGCTGTCCTCGATCCCCGGCAACGCCTACGCGAACGTCCGCCAGCCCATCGTCTCGACGCTGAACCTGGTGCACCTCATGCCGGTGTCAGCGGTATGGGCCGGGCCGGAGAAGAACGACCATCTGGATGGCCCACCGCTGATCATCACGCGCACCGATGGCGCCACGCCGTTCCGGCTGGTGACGCACATCGGCGACGTGGGCCACACGCTGGTCGCCGGCCCGACGGGCATGGGCAAGTCGGTCTTGCTCGCCACGCTGGCGATGCAGTTCCGCCGCTACCCCGGCTCGCGCATCTTCGCGTTCGACATGGGGCGCTCGATGCGTGCCACCATCCTCGGGCTGAGCGGCGAGCACTACGACCTGGGTACGGATGGCGAGATTGCCTTCCAGCCTTTGGCTCGCATCGACCGGGAGGGCTACCGCACCTGGGCGGCGGAATGGATCGAAGGCCGCTTGCGGCATGAAGGCGTAGCTGTCGGCCCGGACGAGAAGGCGGCGGTCTGGTCGGCGCTCGGCAGTCTCGCCGGTGCGCCCGTGCAGCAGCGCACGATGACAGGGTTTTCCGTGCTGCTGCAATCGAACGCGCTGCGGCAGGCGTTCGCGCCCTATGTCTTCGGCGGCGCGCACGGCAAGCTGCTGGATGCGGATTCGGATCGCCTGGGCGCCGGCTCCGTGCAGTGCTTCGAAATGGAGGAGCTGATGCACAGCAAGGCTGCCGTCATGGCCGTGCTGGGCTATCTGTTCGCGCGCTTCGACGAACGCTTCGACGGTGCTCCCACGCTGCTGATGCTCGATGAAGCCTGGTTGTTCTTGGATGACCCGGTGTTTGCCGCGCGCATCCGCCAGTGGCTGAAAACCCTGCGCAAGAAGAACGTCAGCGTCATCTTCGCCACTCAGAGCCTGGCAGACATCAAGGATTCAAGCATCGCGCCCGCGATCATCGAAAGCTGCGCCAGCCGCATCTTCTTGCCGAATCCGCAGGCGACCGAGCCTCAGATCAGGACGATCTATGAGGGTTTCGGCCTCAACAGGCGTCAGATCGAAATCGTGGCGACCGCACAGCCCAAGCGGGACTACTACTACCAATCCCGTCTTGGCAACCGCGTCTTCGACCTCAACCTGGGGCCGGCGACGCTGGCCTTTGTGGGCGCTTCTATGCCGCAGGACCAGCGCGCTATCGACGAAGTTCTTGGCCGCCTGCTGCTGGACGGCGGCGTGCCCGACTTCGCGGGTGCTTGGTTGCGCCATCGCCATCTCGATTGGGCAGCCGACCTGCTGACCTCGTTCCCCGGCCTCGCGTCGGGTTCCCTCCGTACCGCTAACCACCCACAGGAGAACCTCCTATGA
PROTEIN sequence
Length: 824
MLNLAEYRQRPALLADWLTWAGLVAPGVILNKDGSFQRTARFRGPDLDSATQGELISTSARLNNALRRQGSGWALFIEAERRAAADYPHSEFPEPLSWLVDEERRAAFEDSGNHFESGYHLTLVYLPPEESRARAAGMLYENRPTEGVDWRERLSAFVAETDRIFDLLDGVMPEIVWLDDSQTLTYLHATVSTRSYRVGVPEVPFHLDALLADSALIGGLAPMLGDQHLRVATVRGFPTSTWPGILDDLNRLGFAYRWSTRFLCLDKAEAERELGRLRRQWFAKRKNVIALLRETIFQQESPLVDTDASNKAADADAALQELGSDQVSFGYLTATVAVMDADAAVADEKLRMVERVIQGRGFVTIPETLNAVDAWLSSIPGNAYANVRQPIVSTLNLVHLMPVSAVWAGPEKNDHLDGPPLIITRTDGATPFRLVTHIGDVGHTLVAGPTGMGKSVLLATLAMQFRRYPGSRIFAFDMGRSMRATILGLSGEHYDLGTDGEIAFQPLARIDREGYRTWAAEWIEGRLRHEGVAVGPDEKAAVWSALGSLAGAPVQQRTMTGFSVLLQSNALRQAFAPYVFGGAHGKLLDADSDRLGAGSVQCFEMEELMHSKAAVMAVLGYLFARFDERFDGAPTLLMLDEAWLFLDDPVFAARIRQWLKTLRKKNVSVIFATQSLADIKDSSIAPAIIESCASRIFLPNPQATEPQIRTIYEGFGLNRRQIEIVATAQPKRDYYYQSRLGNRVFDLNLGPATLAFVGASMPQDQRAIDEVLGRLLLDGGVPDFAGAWLRHRHLDWAADLLTSFPGLASGSLRTANHPQENLL*