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cn_combo_scaffold_3980_7

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: comp(7527..7778)

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HVM0_PSEUO similarity UNIREF
DB: UNIREF100
  • Identity: 95.2
  • Coverage: 83.0
  • Bit_score: 169
  • Evalue 1.70e-39
putative conjugal transfer trbD transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 95.2
  • Coverage: 83.0
  • Bit_score: 169
  • Evalue 4.80e-40
Type IV secretory pathway, VirB3-like protein {ECO:0000313|EMBL:KCB37746.1}; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 95.2
  • Coverage: 83.0
  • Bit_score: 169
  • Evalue 1.80e-39

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Taxonomy

Bordetella sp. 8-296-03 → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 252
ATGCCTGGCTTCGAGGTGCCGCTGCATCGCTCGCTGACCGAGCCGATCCTACTGGGCGGTGCACCGCGCACCGTGGCGATTGCCAACGGTACGCTGGCCGCCGCCGTGGGGTTGGGGCTGCAACTGTGGATTCCGGGCTTGGTGCTCTGGATCGTTGGCCATGCGCTGGCGGTTTGGGGTGCCCGCGTCGATCCGCAGTTCATGCAGGTCTTTGCGCGGCACGTCAAGCACAAGCCACTGCTGGACGTGTGA
PROTEIN sequence
Length: 84
MPGFEVPLHRSLTEPILLGGAPRTVAIANGTLAAAVGLGLQLWIPGLVLWIVGHALAVWGARVDPQFMQVFARHVKHKPLLDV*