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cn_combo_scaffold_4374_5

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: 4654..6075

Top 3 Functional Annotations

Value Algorithm Source
rbcL; Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (RuBisCO large subunit) (EC:4.1.1.39) id=12496249 bin=THIO_MID species=unknown genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 98.5
  • Coverage: 474.0
  • Bit_score: 974
  • Evalue 3.30e-281
ribulose-bisphosphate carboxylase (EC:4.1.1.39) similarity KEGG
DB: KEGG
  • Identity: 96.6
  • Coverage: 473.0
  • Bit_score: 956
  • Evalue 2.70e-276
Ribulose bisphosphate carboxylase large chain {ECO:0000255|HAMAP-Rule:MF_01338}; Short=RuBisCO large subunit {ECO:0000255|HAMAP-Rule:MF_01338};; EC=4.1.1.39 {ECO:0000255|HAMAP-Rule:MF_01338};; TaxID=7 similarity UNIPROT
DB: UniProtKB
  • Identity: 96.6
  • Coverage: 473.0
  • Bit_score: 956
  • Evalue 1.30e-275

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Notes

Type IA. Rose Kantor (6/30/14)

Taxonomy

Thiomonas intermedia → Thiomonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1422
ATGGCAGTCAAAACCTATCAGGCCGGGGTGAAGGAATACCGGCAGACCTACTGGATGCCGGAGTACACCCCTCTGGATACCGACCTCTTGGCCTGTTTCAAGATCACCCCCCAGCCGGGCATCGATCGTGAGGAAGCCGCTGCCGCCGTGGCCGCCGAGTCGTCGACCGGCACCTGGACCACGGTGTGGACCGACCTCCTGACCGACATGGACTACTACAAGGGCCGCGCCTACCGCATCGAAGACGTGCCGGGTGACGACACCTGCTTCTATGCCTTCATCGCCTACCCGATCGACCTGTTCGAAGAAGGCTCGGTCGTCAACGTGTTCACCTCGCTGGTCGGCAACGTGTTCGGCTTCAAGGCGATCCGCGCCCTGCGTCTGGAAGACATCCGCTTCCCGCTCGCCTACGTCAAGACCTGCAACGGCCCGCCCAACGGCATCCAGGTCGAGCGCGACATGATGAACAAGTACGGCCGTCCGCTGCTGGGCTGCACCATCAAGCCGAAACTGGGTCTGTCGGGCAAGAACTACGGTCGCGCCGTGTACGAGTGCCTGCGCGGCGGTCTGGACTTCACCAAGGACGACGAGAACATCAACTCGCAGCCGTTCATGCGCTGGAAGCAGCGTTTCGACTTCGTGCAGGAAGCCACCCTCAAGGCCGAAGCCGAGACCGGCGAGCGCAAGGGCCACTACCTGAACGTGACCGCGCCGACCCCGGACGAGATGATGAAGCGTGCCGAGTACGCCAAGGAAATCGGCGCACCGATCATCATGCACGACTACATCACCGGCGGTTTCTGCGCCAACACCGGTCTGGCCCAGTGGTGCCGCGACAACGGCATGCTGCTGCACATCCACCGCGCCATGCACGCCGTGCTCGACCGCAACCCGCACCACGGCATCCACTTCCGCGTGCTGACCAAGATCCTGCGTCTGTCGGGCGGTGACCACCTGCACACCGGTACCGTCGTGGGCAAGCTGGAAGGCGACCGCGCCTCCACCCTCGGCTGGATCGACCTGCTGCGTGAATCCTTCGTGCCGGAAGACCGCTCGCGCGGCATCTTCTTCGACCAGGACTGGGGTTCGATGCCCGGCGGCTTTGCCGTGGCCTCCGGTGGTATCCACGTGTGGCACATGCCCGCGCTGGTCACCATCTTCGGCGACGACTCCGTGCTGCAGTTCGGTGGCGGCACCCTGGGCCACCCCTGGGGCAACGCGGCCGGCGCCCACGCCAACCGCGTCGCGCTGGAAGCCTGCGTCCAGGCCCGCAACGAAGGCCGCCAGCTGGAGAAGGAAGGCAAGGAGATCCTTACCGCCGCCGCTGCAAGCTCGCCCGAACTGAAGATCGCCATGGAAACCTGGAAAGAGATCAAGTTCGAGTTCGACACCGTCGACAAGCTGGACATCGCGAACAAGTAA
PROTEIN sequence
Length: 474
MAVKTYQAGVKEYRQTYWMPEYTPLDTDLLACFKITPQPGIDREEAAAAVAAESSTGTWTTVWTDLLTDMDYYKGRAYRIEDVPGDDTCFYAFIAYPIDLFEEGSVVNVFTSLVGNVFGFKAIRALRLEDIRFPLAYVKTCNGPPNGIQVERDMMNKYGRPLLGCTIKPKLGLSGKNYGRAVYECLRGGLDFTKDDENINSQPFMRWKQRFDFVQEATLKAEAETGERKGHYLNVTAPTPDEMMKRAEYAKEIGAPIIMHDYITGGFCANTGLAQWCRDNGMLLHIHRAMHAVLDRNPHHGIHFRVLTKILRLSGGDHLHTGTVVGKLEGDRASTLGWIDLLRESFVPEDRSRGIFFDQDWGSMPGGFAVASGGIHVWHMPALVTIFGDDSVLQFGGGTLGHPWGNAAGAHANRVALEACVQARNEGRQLEKEGKEILTAAAASSPELKIAMETWKEIKFEFDTVDKLDIANK*