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cn_combo_scaffold_5445_16

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: comp(9624..10514)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma 70 n=1 Tax=Rhizobium leguminosarum RepID=UPI00037C5E31 similarity UNIREF
DB: UNIREF100
  • Identity: 62.8
  • Coverage: 296.0
  • Bit_score: 344
  • Evalue 8.10e-92
RNA polymerase, sigma-24 subunit, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 62.2
  • Coverage: 296.0
  • Bit_score: 341
  • Evalue 3.30e-91
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACS59743.1}; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium g similarity UNIPROT
DB: UniProtKB
  • Identity: 62.2
  • Coverage: 296.0
  • Bit_score: 341
  • Evalue 1.60e-90

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Taxonomy

Rhizobium leguminosarum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 891
ATGGACGAGCAGAAAATTCTCGGCGACCGCTTCGAGGCCAATCGCAAGCATCTCTATCGCGTTGCCTACCGCATGCTGGGGTCGCCGGGGGAGGCCGAGGACGCCGTCCAGGAAGCGTGGCTGCGCCTCAGCCGTGCCGGCGCCGACAATGTCGACAACCTCTCGGGCTGGCTGACCACGGTGGTGGCGCGCGTCTGTCTCGACATGTTGCGCGCCCGCAAGACGCGGCGCGAAGAGCCGCTGGAAGTCTCCGACGACAAAGGCGGCGAAGAGAAGCCGGCGGCAGCTGCCGCTGTTCGCGGAGCGAGCGACCCCGAGCAGGAGGCGGTGCTGGCCGACTCGGTCGGGCTTGCGCTGCTTGTCGTGCTCCAGACGCTCGCGCCGGCGGAGCGCGTCGCCTTCGTTCTGCACGACATGTTCGATCTTTCCTTCGACGAGATTGCGTCGGTGGTCGGCCGCACGCCGGTTGCGACCCGCCAGCTCGCAAGCCGCGCCCGTCGCCGTGTCCAAGGCAAGCCCGCCGTGCCCGACGACGATCTCAATCGTCGGCGCAGCGTCGTCGAGGCTTTCCTCGCGGCATCGCGCGGCGGCGATTTCGAGGGCCTCCTGGCCGTGCTGGATCCCGGCGTTGTGGCACATGCCGACGGTGCGGCCGTGAAACTCGGCTCCGTGCCGGAGATGCATGGCGCCGAGGTCGTTGCCCGTGCTTTCAAGGGCCGCGCCCGCCATGCACAGGTGGCTCTGATCGATGGTGCGCCCGGCGTCGTCGTGGCTCCGTACGGCAGGCTTCTGCTGGTGCTGCGCACCAGGGTCGTCGATGGCCTTATCGTAGAGATCGAAGCCATCGCCGCACCGCGGCGACTGAGGGAACTCGACCTGGCCATGCTGTAA
PROTEIN sequence
Length: 297
MDEQKILGDRFEANRKHLYRVAYRMLGSPGEAEDAVQEAWLRLSRAGADNVDNLSGWLTTVVARVCLDMLRARKTRREEPLEVSDDKGGEEKPAAAAAVRGASDPEQEAVLADSVGLALLVVLQTLAPAERVAFVLHDMFDLSFDEIASVVGRTPVATRQLASRARRRVQGKPAVPDDDLNRRRSVVEAFLAASRGGDFEGLLAVLDPGVVAHADGAAVKLGSVPEMHGAEVVARAFKGRARHAQVALIDGAPGVVVAPYGRLLLVLRTRVVDGLIVEIEAIAAPRRLRELDLAML*