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cn_combo_scaffold_5445_22

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: 14613..15338

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, histidine utilization repressor, GntR family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V090_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 73.3
  • Coverage: 240.0
  • Bit_score: 370
  • Evalue 1.50e-99
Variovorax paradoxus strain MEDvA23 contig_4, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ37013.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonad similarity UNIPROT
DB: UniProtKB
  • Identity: 73.3
  • Coverage: 240.0
  • Bit_score: 371
  • Evalue 1.20e-99
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 73.3
  • Coverage: 240.0
  • Bit_score: 370
  • Evalue 4.20e-100

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 726
ATGGAACCGACGGCGCGCTATCAGCAGGTCGAGGACTACATCGTCCGGCGCATCCAGGACGGTTCCTGGCCGCCGGGTCACCGCCTGCCGTCGGAACACGAACTGGTCCAGCAGTTCGGCATGTCGCGCATGACCGTCAATCGGGCGCTGCGCGACCTGATGCAGAAGGGCCGCATCGTGCGTGTCGCCGGTGTCGGCAGTTTCGTCGCCCAGGACAAGCCGCAGTTGACGTTGCTGCAGATCGCCAGCATCGGCCGCGAGGTTCGCCAGCGCGGCCATGACTATCGTTGTGCCCCGCTCGCCGCCGATCGGGTCGCCGCCCCTCCCGACGTCGCCGCCTGGCTCGGCCTGCATGCCGGCGCGTCGGTCTTTCACGCGGTGTGTCTTCACCTCGAAAACGAGGTCCCGGTCCAGCTTGAGGATCGCTACGTCAACCCGAGCATCGTGCCGAACTTCCTGGATCAGGATTTCAGCACCGTGCCGCCGGGCGACTATCTGGTGCAGAACGTGCCGTTCGACGAGATCGAGCATGTCGTCGATGCCGTTCTGCCGACCGACGAACAGGCCGCGCATCTGAAGATCGCAGCGCCCGAGCCCTGCCTGCTGCTGACGCGGCGCACCTGGACGCGCACCACGCCGGTCACGATGGTGCGCTGCCTGCACCCCTCCTCGCGCTATCGCCTCGGCAGCCGCTTCGACGCGGTTGGAAACCAGCGTTTTGGCTAG
PROTEIN sequence
Length: 242
MEPTARYQQVEDYIVRRIQDGSWPPGHRLPSEHELVQQFGMSRMTVNRALRDLMQKGRIVRVAGVGSFVAQDKPQLTLLQIASIGREVRQRGHDYRCAPLAADRVAAPPDVAAWLGLHAGASVFHAVCLHLENEVPVQLEDRYVNPSIVPNFLDQDFSTVPPGDYLVQNVPFDEIEHVVDAVLPTDEQAAHLKIAAPEPCLLLTRRTWTRTTPVTMVRCLHPSSRYRLGSRFDAVGNQRFG*